This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3gw2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:56, 16 March 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3gw2.png|left|200px]]
 
-
{{STRUCTURE_3gw2| PDB=3gw2 | SCENE= }}
+
==Crystal structure of possible transcriptional regulatory protein (fragment 1-100) from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR242E.==
-
 
+
<StructureSection load='3gw2' size='340' side='right'caption='[[3gw2]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
===Crystal structure of possible transcriptional regulatory protein (fragment 1-100) from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR242E.===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3gw2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycbo Mycbo]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GW2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GW2 FirstGlance]. <br>
-
 
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
==About this Structure==
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Mb0332 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=233413 MYCBO])</td></tr>
-
[[3gw2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_bovis Mycobacterium bovis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GW2 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gw2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gw2 OCA], [https://pdbe.org/3gw2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gw2 RCSB], [https://www.ebi.ac.uk/pdbsum/3gw2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gw2 ProSAT]</span></td></tr>
-
[[Category: Mycobacterium bovis]]
+
</table>
-
[[Category: Acton, T B.]]
+
== Evolutionary Conservation ==
-
[[Category: Ciccosanti, C.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Everett, J K.]]
+
Check<jmol>
-
[[Category: Hunt, J F.]]
+
<jmolCheckbox>
-
[[Category: Kuzin, A P.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gw/3gw2_consurf.spt"</scriptWhenChecked>
-
[[Category: Mao, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Montelione, G T.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
</jmolCheckbox>
-
[[Category: Nair, R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gw2 ConSurf].
-
[[Category: Rost, B.]]
+
<div style="clear:both"></div>
-
[[Category: Seetharaman, J.]]
+
__TOC__
-
[[Category: Su, M.]]
+
</StructureSection>
-
[[Category: Tong, L.]]
+
[[Category: Large Structures]]
-
[[Category: Wang, D.]]
+
[[Category: Mycbo]]
-
[[Category: Xiao, R.]]
+
[[Category: Acton, T B]]
 +
[[Category: Ciccosanti, C]]
 +
[[Category: Everett, J K]]
 +
[[Category: Hunt, J F]]
 +
[[Category: Kuzin, A P]]
 +
[[Category: Mao, M]]
 +
[[Category: Montelione, G T]]
 +
[[Category: Structural genomic]]
 +
[[Category: Nair, R]]
 +
[[Category: Rost, B]]
 +
[[Category: Seetharaman, J]]
 +
[[Category: Su, M]]
 +
[[Category: Tong, L]]
 +
[[Category: Wang, D]]
 +
[[Category: Xiao, R]]
[[Category: Dna-binding]]
[[Category: Dna-binding]]
[[Category: Mbr242e]]
[[Category: Mbr242e]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
[[Category: Q7u294]]
[[Category: Q7u294]]
-
[[Category: Structural genomic]]
 
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
[[Category: Transcription regulator]]
[[Category: Transferase]]
[[Category: Transferase]]

Current revision

Crystal structure of possible transcriptional regulatory protein (fragment 1-100) from Mycobacterium bovis. Northeast Structural Genomics Consortium Target MbR242E.

PDB ID 3gw2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools