3hvw
From Proteopedia
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- | [[Image:3hvw.png|left|200px]] | ||
- | + | ==Crystal Structure of the GGDEF domain of the PA2567 protein from Pseudomonas aeruginosa, Northeast Structural Genomics Consortium Target PaR365C== | |
+ | <StructureSection load='3hvw' size='340' side='right'caption='[[3hvw]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3hvw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HVW FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hvw OCA], [https://pdbe.org/3hvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hvw RCSB], [https://www.ebi.ac.uk/pdbsum/3hvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hvw ProSAT], [https://www.topsan.org/Proteins/NESGC/3hvw TOPSAN]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/CDPD3_PSEAE CDPD3_PSEAE] Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to 5'-pGpG.<ref>PMID:19376848</ref> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hv/3hvw_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hvw ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
- | == | + | ==See Also== |
- | + | *[[Diguanylate cyclase|Diguanylate cyclase]] | |
- | + | == References == | |
- | == | + | <references/> |
- | [[ | + | __TOC__ |
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
- | [[Category: Acton | + | [[Category: Acton TB]] |
- | [[Category: Ciccosanti | + | [[Category: Ciccosanti C]] |
- | [[Category: Everett | + | [[Category: Everett JK]] |
- | [[Category: Foote | + | [[Category: Foote EL]] |
- | [[Category: Forouhar | + | [[Category: Forouhar F]] |
- | [[Category: Hunt | + | [[Category: Hunt JF]] |
- | [[Category: Lew | + | [[Category: Lew S]] |
- | [[Category: Montelione | + | [[Category: Montelione GT]] |
- | + | [[Category: Nair R]] | |
- | [[Category: Nair | + | [[Category: Rost B]] |
- | [[Category: Rost | + | [[Category: Sahdev S]] |
- | [[Category: Sahdev | + | [[Category: Seetharaman J]] |
- | [[Category: Seetharaman | + | [[Category: Tong L]] |
- | [[Category: Tong | + | [[Category: Wang H]] |
- | [[Category: Wang | + | [[Category: Xiao R]] |
- | [[Category: Xiao | + | |
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Current revision
Crystal Structure of the GGDEF domain of the PA2567 protein from Pseudomonas aeruginosa, Northeast Structural Genomics Consortium Target PaR365C
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Categories: Large Structures | Pseudomonas aeruginosa | Acton TB | Ciccosanti C | Everett JK | Foote EL | Forouhar F | Hunt JF | Lew S | Montelione GT | Nair R | Rost B | Sahdev S | Seetharaman J | Tong L | Wang H | Xiao R