2pod

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:19, 21 November 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_2pod| PDB=2pod | SCENE= }}
 
-
===Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243===
 
-
==About this Structure==
+
==Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243==
-
[[2pod]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POD OCA].
+
<StructureSection load='2pod' size='340' side='right'caption='[[2pod]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2POD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2POD FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.34&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pod OCA], [https://pdbe.org/2pod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pod RCSB], [https://www.ebi.ac.uk/pdbsum/2pod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pod ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pod TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/po/2pod_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pod ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
 +
*[[Enolase 3D structures|Enolase 3D structures]]
*[[Mandelate racemase|Mandelate racemase]]
*[[Mandelate racemase|Mandelate racemase]]
-
[[Category: Burkholderia pseudomallei]]
+
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
-
[[Category: Almo, S C.]]
+
__TOC__
-
[[Category: Bonanno, J.]]
+
</StructureSection>
-
[[Category: Burley, S K.]]
+
[[Category: Large Structures]]
-
[[Category: Gerlt, J.]]
+
[[Category: Almo SC]]
-
[[Category: Gilmore, J M.]]
+
[[Category: Bonanno J]]
-
[[Category: Iizuka, M.]]
+
[[Category: Burley SK]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Gerlt J]]
-
[[Category: Ozyurt, S.]]
+
[[Category: Gilmore JM]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Iizuka M]]
-
[[Category: Sauder, J M.]]
+
[[Category: Ozyurt S]]
-
[[Category: Smith, D.]]
+
[[Category: Patskovsky Y]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Sauder JM]]
-
[[Category: Enolase]]
+
[[Category: Smith D]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: Wasserman SR]]
-
[[Category: New york structural genomics research consortium]]
+
-
[[Category: Nysgrc]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Racemase]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243

PDB ID 2pod

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pod"
Personal tools