2w5v

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{{STRUCTURE_2w5v| PDB=2w5v | SCENE= }}
 
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===STRUCTURE OF TAB5 ALKALINE PHOSPHATASE MUTANT HIS 135 ASP WITH MG BOUND IN THE M3 SITE.===
 
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{{ABSTRACT_PUBMED_19916164}}
 
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==About this Structure==
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==Structure of TAB5 alkaline phosphatase mutant His 135 Asp with Mg bound in the M3 site.==
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[[2w5v]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Antarctic_bacterium_tab5 Antarctic bacterium tab5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5V OCA].
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<StructureSection load='2w5v' size='340' side='right'caption='[[2w5v]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2w5v]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Antarctic_bacterium_TAB5 Antarctic bacterium TAB5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W5V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W5V FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w5v OCA], [https://pdbe.org/2w5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w5v RCSB], [https://www.ebi.ac.uk/pdbsum/2w5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w5v ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w5/2w5v_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2w5v ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Alkaline phosphatases (APs) are commercially applied enzymes that catalyze the hydrolysis of phosphate monoesters by a reaction involving three active site metal ions. We have previously identified H135 as the key residue for controlling activity of the psychrophilic TAB5 AP (TAP). In this paper we describe three X-ray crystallographic structures on TAP variants H135E and H135D in complex with a variety of metal ions. The structural analysis is supported by thermodynamic and kinetic data. The AP catalysis essentially requires octahedral coordination in the M3 site, but stability is adjusted with the conformational freedom of the metal ion. Comparison to the mesophilic E. coli alkaline phosphatase shows differences in the charge transfer network in providing the chemically optimal metal combination for catalysis. Our results provide explanation why the TAB5 and E. coli APs respond in an opposite way to mutagenesis in their active sites. They provide a lesson on chemical fine tuning and the importance of the second coordination sphere in defining metal specificity in enzymes. Understanding the framework of alkaline phosphatase catalysis is essential in the efforts to design even more powerful tools for modern biotechnology.
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==See Also==
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Coordination sphere of the third metal site is essential to the activity and metal selectivity of alkaline phosphatases.,Koutsioulis D, Lyskowski A, Maki S, Guthrie E, Feller G, Bouriotis V, Heikinheimo P Protein Sci. 2009 Nov 13. PMID:19916164<ref>PMID:19916164</ref>
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*[[Alkaline phosphatase|Alkaline phosphatase]]
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*[[User:Andrzej Lyskowski|User:Andrzej Lyskowski]]
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:019916164</ref><references group="xtra"/>
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</div>
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[[Category: Alkaline phosphatase]]
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<div class="pdbe-citations 2w5v" style="background-color:#fffaf0;"></div>
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[[Category: Antarctic bacterium tab5]]
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[[Category: Bouriotis, V.]]
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==See Also==
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[[Category: Feller, G.]]
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*[[Alkaline phosphatase 3D structures|Alkaline phosphatase 3D structures]]
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[[Category: Guthrie, E.]]
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== References ==
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[[Category: Heikinheimo, P.]]
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<references/>
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[[Category: Koutsioulis, D.]]
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__TOC__
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[[Category: Lyskowski, A.]]
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</StructureSection>
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[[Category: Maki, S.]]
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[[Category: Antarctic bacterium TAB5]]
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[[Category: Alkaline phosphatase]]
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[[Category: Large Structures]]
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[[Category: Cold adaptation]]
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[[Category: Bouriotis V]]
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[[Category: Hydrolase]]
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[[Category: Feller G]]
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[[Category: Psychrophile]]
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[[Category: Guthrie E]]
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[[Category: Heikinheimo P]]
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[[Category: Koutsioulis D]]
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[[Category: Lyskowski A]]
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[[Category: Maki S]]

Current revision

Structure of TAB5 alkaline phosphatase mutant His 135 Asp with Mg bound in the M3 site.

PDB ID 2w5v

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