3k3f
From Proteopedia
(Difference between revisions)
| (5 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3k3f| PDB=3k3f | SCENE= }} | ||
| - | ===Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris=== | ||
| - | {{ABSTRACT_PUBMED_19865084}} | ||
| - | == | + | ==Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris== |
| - | [[3k3f]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3k3f' size='340' side='right'caption='[[3k3f]], [[Resolution|resolution]] 2.30Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3k3f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K3F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K3F FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k3f OCA], [https://pdbe.org/3k3f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k3f RCSB], [https://www.ebi.ac.uk/pdbsum/3k3f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k3f ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/UT_DESVH UT_DESVH] Urea channel that facilitates transmembrane urea transport down a concentration gradient.<ref>PMID:19865084</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k3/3k3f_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k3f ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Urea transporter|Urea transporter]] | *[[Urea transporter|Urea transporter]] | ||
| - | + | == References == | |
| - | == | + | <references/> |
| - | < | + | __TOC__ |
| - | [[Category: Desulfovibrio vulgaris]] | + | </StructureSection> |
| - | [[Category: | + | [[Category: Desulfovibrio vulgaris str. Hildenborough]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Zhou | + | [[Category: Levin EJ]] |
| - | + | [[Category: Zhou M]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris
| |||||||||||
