2ggn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:27, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_2ggn| PDB=2ggn | SCENE= }}
 
-
===Conformational mobility in the active site of a heme peroxidase===
 
-
{{ABSTRACT_PUBMED_16762924}}
 
-
==About this Structure==
+
==Conformational mobility in the active site of a heme peroxidase==
-
[[2ggn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGN OCA].
+
<StructureSection load='2ggn' size='340' side='right'caption='[[2ggn]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2ggn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GGN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GGN FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ggn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ggn OCA], [https://pdbe.org/2ggn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ggn RCSB], [https://www.ebi.ac.uk/pdbsum/2ggn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ggn ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q43758_SOYBN Q43758_SOYBN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/2ggn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ggn ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Ascorbate peroxidase|Ascorbate peroxidase]]
+
*[[Ascorbate peroxidase 3D structures|Ascorbate peroxidase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:016762924</ref><references group="xtra"/>
+
[[Category: Glycine max]]
[[Category: Glycine max]]
-
[[Category: L-ascorbate peroxidase]]
+
[[Category: Large Structures]]
-
[[Category: Badyal, S K.]]
+
[[Category: Badyal SK]]
-
[[Category: Joyce, M G.]]
+
[[Category: Joyce MG]]
-
[[Category: Moody, P C.E.]]
+
[[Category: Moody PCE]]
-
[[Category: Raven, E L.]]
+
[[Category: Raven EL]]
-
[[Category: Sharp, K H.]]
+
[[Category: Sharp KH]]
-
[[Category: Orthogonal bundle]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Conformational mobility in the active site of a heme peroxidase

PDB ID 2ggn

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools