This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3h92
From Proteopedia
(Difference between revisions)
m (Protected "3h92" [edit=sysop:move=sysop]) |
|||
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3h92| PDB=3h92 | SCENE= }} | ||
| - | ===The crystal structure of one domain of the protein with unknown function from Methanocaldococcus jannaschii=== | ||
| - | == | + | ==The crystal structure of one domain of the protein with unknown function from Methanocaldococcus jannaschii== |
| - | [[3h92]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3h92' size='340' side='right'caption='[[3h92]], [[Resolution|resolution]] 2.20Å' scene=''> |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: Hatzos, C | + | <table><tr><td colspan='2'>[[3h92]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H92 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H92 FirstGlance]. <br> |
| - | [[Category: Joachimiak, A | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene></td></tr> |
| - | [[Category: | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Moy, S | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GI:1522655, MJECL15 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr> |
| - | [[Category: Zhang, R | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h92 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h92 OCA], [https://pdbe.org/3h92 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h92 RCSB], [https://www.ebi.ac.uk/pdbsum/3h92 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h92 ProSAT], [https://www.topsan.org/Proteins/MCSG/3h92 TOPSAN]</span></td></tr> |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h9/3h92_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3h92 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Atcc 43067]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hatzos, C]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Moy, S]] | ||
| + | [[Category: Zhang, R]] | ||
[[Category: Atp-binding]] | [[Category: Atp-binding]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Nucleotide-binding]] | [[Category: Nucleotide-binding]] | ||
| - | [[Category: Protein structure initiative]] | + | [[Category: PSI, Protein structure initiative]] |
[[Category: Protein with unknown function]] | [[Category: Protein with unknown function]] | ||
| - | [[Category: Psi]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Current revision
The crystal structure of one domain of the protein with unknown function from Methanocaldococcus jannaschii
| |||||||||||
