3ibs
From Proteopedia
(Difference between revisions)
m (Protected "3ibs" [edit=sysop:move=sysop]) |
|||
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3ibs| PDB=3ibs | SCENE= }} | ||
| - | ===Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron=== | ||
| - | == | + | ==Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron== |
| - | [[3ibs]] is a 2 chain structure with sequence from [ | + | <StructureSection load='3ibs' size='340' side='right'caption='[[3ibs]], [[Resolution|resolution]] 2.10Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3ibs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IBS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IBS FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ibs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ibs OCA], [https://pdbe.org/3ibs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ibs RCSB], [https://www.ebi.ac.uk/pdbsum/3ibs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ibs ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8A9A9_BACTN Q8A9A9_BACTN] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/3ibs_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ibs ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Bacteroides thetaiotaomicron]] | [[Category: Bacteroides thetaiotaomicron]] | ||
| - | [[Category: Bearden | + | [[Category: Large Structures]] |
| - | [[Category: Borek | + | [[Category: Bearden J]] |
| - | [[Category: Hattne | + | [[Category: Borek D]] |
| - | [[Category: Joachimiak | + | [[Category: Hattne J]] |
| - | + | [[Category: Joachimiak A]] | |
| - | [[Category: Nakka | + | [[Category: Nakka C]] |
| - | [[Category: Otwinowski | + | [[Category: Otwinowski Z]] |
| - | [[Category: Sather | + | [[Category: Sather A]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of conserved hypothetical protein BatB from Bacteroides thetaiotaomicron
| |||||||||||
