3imf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3imf" [edit=sysop:move=sysop])
Current revision (10:01, 6 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3imf| PDB=3imf | SCENE= }}
 
-
===1.99 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor'===
 
-
==About this Structure==
+
==1.99 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor'==
-
[[3imf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_str._'ames_ancestor' Bacillus anthracis str. 'ames ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IMF OCA].
+
<StructureSection load='3imf' size='340' side='right'caption='[[3imf]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
-
[[Category: Bacillus anthracis str. 'ames ancestor']]
+
== Structural highlights ==
-
[[Category: Anderson, W F.]]
+
<table><tr><td colspan='2'>[[3imf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IMF FirstGlance]. <br>
-
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-
[[Category: Gordon, E.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Halavaty, A S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3imf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3imf OCA], [https://pdbe.org/3imf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3imf RCSB], [https://www.ebi.ac.uk/pdbsum/3imf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3imf ProSAT], [https://www.topsan.org/Proteins/CSGID/3imf TOPSAN]</span></td></tr>
-
[[Category: Minasov, G.]]
+
</table>
-
[[Category: Onopriyenko, O.]]
+
== Function ==
-
[[Category: Peterson, S.]]
+
[https://www.uniprot.org/uniprot/A0A6L8NTZ6_BACAN A0A6L8NTZ6_BACAN]
-
[[Category: Savchenko, A.]]
+
== Evolutionary Conservation ==
-
[[Category: Skarina, T.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Center for structural genomics of infectious disease]]
+
Check<jmol>
-
[[Category: Csgid]]
+
<jmolCheckbox>
-
[[Category: Infectious disease]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/3imf_consurf.spt"</scriptWhenChecked>
-
[[Category: Oxidoreductase]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Short chain dehydrogenase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Structural genomic]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3imf ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus anthracis str. 'Ames Ancestor']]
 +
[[Category: Large Structures]]
 +
[[Category: Anderson WF]]
 +
[[Category: Gordon E]]
 +
[[Category: Halavaty AS]]
 +
[[Category: Minasov G]]
 +
[[Category: Onopriyenko O]]
 +
[[Category: Peterson S]]
 +
[[Category: Savchenko A]]
 +
[[Category: Skarina T]]

Current revision

1.99 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor'

PDB ID 3imf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools