This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3iii
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3iii| PDB=3iii | SCENE= }} | ||
| - | ===1.95 Angstrom Crystal Structure of CocE/NonD family hydrolase (SACOL2612) from Staphylococcus aureus=== | ||
| - | == | + | ==1.95 Angstrom Crystal Structure of CocE/NonD family hydrolase (SACOL2612) from Staphylococcus aureus== |
| - | [[3iii]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3iii' size='340' side='right'caption='[[3iii]], [[Resolution|resolution]] 1.95Å' scene=''> |
| - | [[ | + | == Structural highlights == |
| - | [[Category: Anderson, W F | + | <table><tr><td colspan='2'>[[3iii]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staac Staac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3III OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3III FirstGlance]. <br> |
| - | [[Category: | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr> |
| - | [[Category: Chruszcz, M | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Cymborowski, M | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SACOL2612 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=93062 STAAC])</td></tr> |
| - | [[Category: Domagalski, M J | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iii OCA], [https://pdbe.org/3iii PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iii RCSB], [https://www.ebi.ac.uk/pdbsum/3iii PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iii ProSAT]</span></td></tr> |
| - | [[Category: Edwards, A | + | </table> |
| - | [[Category: Minor, W | + | == Evolutionary Conservation == |
| - | [[Category: Onopriyenko, O | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Osinski, T | + | Check<jmol> |
| - | [[Category: Savchenko, A | + | <jmolCheckbox> |
| - | [[Category: Shumilin, I A | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ii/3iii_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Skarina, T | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Zimmerman, M D | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iii ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Staac]] | ||
| + | [[Category: Anderson, W F]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Chruszcz, M]] | ||
| + | [[Category: Cymborowski, M]] | ||
| + | [[Category: Domagalski, M J]] | ||
| + | [[Category: Edwards, A]] | ||
| + | [[Category: Minor, W]] | ||
| + | [[Category: Onopriyenko, O]] | ||
| + | [[Category: Osinski, T]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Shumilin, I A]] | ||
| + | [[Category: Skarina, T]] | ||
| + | [[Category: Zimmerman, M D]] | ||
[[Category: Csgid]] | [[Category: Csgid]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
| - | [[Category: Structural genomic]] | ||
Current revision
1.95 Angstrom Crystal Structure of CocE/NonD family hydrolase (SACOL2612) from Staphylococcus aureus
| |||||||||||
