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2cvc
From Proteopedia
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| - | [[Image:2cvc.gif|left|200px]]<br /><applet load="2cvc" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2cvc, resolution 2.00Å" /> | ||
| - | '''Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)'''<br /> | ||
| - | == | + | ==Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)== |
| - | + | <StructureSection load='2cvc' size='340' side='right'caption='[[2cvc]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2cvc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CVC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CVC FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cvc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cvc OCA], [https://pdbe.org/2cvc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cvc RCSB], [https://www.ebi.ac.uk/pdbsum/2cvc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cvc ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/HMWC_DESVH HMWC_DESVH] HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates. | |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cv/2cvc_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cvc ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Cytochrome C 3D structures|Cytochrome C 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Desulfovibrio vulgaris]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Akutsu H]] | ||
| + | [[Category: Higuchi Y]] | ||
| + | [[Category: Kitamura M]] | ||
| + | [[Category: Morimoto Y]] | ||
| + | [[Category: Ozawa K]] | ||
| + | [[Category: Sato M]] | ||
| + | [[Category: Shibata N]] | ||
| + | [[Category: Suto K]] | ||
| + | [[Category: Takayama Y]] | ||
| + | [[Category: Yasuoka N]] | ||
Current revision
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
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Categories: Desulfovibrio vulgaris | Large Structures | Akutsu H | Higuchi Y | Kitamura M | Morimoto Y | Ozawa K | Sato M | Shibata N | Suto K | Takayama Y | Yasuoka N
