This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2d66
From Proteopedia
(Difference between revisions)
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2d66.gif|left|200px]]<br /><applet load="2d66" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2d66, resolution 2.18Å" /> | ||
| - | '''Aspartate Aminotransferase Mutant MAB'''<br /> | ||
| - | == | + | ==Aspartate Aminotransferase Mutant MAB== |
| - | + | <StructureSection load='2d66' size='340' side='right'caption='[[2d66]], [[Resolution|resolution]] 2.18Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[2d66]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D66 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D66 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.18Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d66 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d66 OCA], [https://pdbe.org/2d66 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d66 RCSB], [https://www.ebi.ac.uk/pdbsum/2d66 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d66 ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | [[ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/Q304P7_ECOLX Q304P7_ECOLX] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d6/2d66_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d66 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Aspartate aminotransferase 3D structures|Aspartate aminotransferase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Escherichia coli]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Kuramitsu S]] | ||
| + | [[Category: Masui R]] | ||
| + | [[Category: Nakagawa N]] | ||
| + | [[Category: Tada H]] | ||
| + | [[Category: Tanaka Y]] | ||
| + | [[Category: Yano T]] | ||
Current revision
Aspartate Aminotransferase Mutant MAB
| |||||||||||
Categories: Escherichia coli | Large Structures | Kuramitsu S | Masui R | Nakagawa N | Tada H | Tanaka Y | Yano T
