3u5k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:48, 14 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3u5k| PDB=3u5k | SCENE= }}
 
-
===Crystal Structure of the first bromodomain of human BRD4 in complex with Midazolam===
 
-
{{ABSTRACT_PUBMED_22137933}}
 
-
==Disease==
+
==Crystal Structure of the first bromodomain of human BRD4 in complex with Midazolam==
-
[[http://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN]] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref><ref>PMID:11733348</ref>
+
<StructureSection load='3u5k' size='340' side='right'caption='[[3u5k]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3u5k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U5K FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=08J:8-CHLORO-6-(2-FLUOROPHENYL)-1-METHYL-4H-IMIDAZO[1,5-A][1,4]BENZODIAZEPINE'>08J</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u5k OCA], [https://pdbe.org/3u5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u5k RCSB], [https://www.ebi.ac.uk/pdbsum/3u5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u5k ProSAT]</span></td></tr>
 +
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
-
==Function==
+
==See Also==
-
[[http://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN]] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
+
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
[[3u5k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U5K OCA].
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
-
<ref group="xtra">PMID:022137933</ref><references group="xtra"/><references/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Large Structures]]
-
[[Category: Bountra, C.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Delft, F von.]]
+
[[Category: Bountra C]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Fedorov, O.]]
+
[[Category: Fedorov O]]
-
[[Category: Felletar, I.]]
+
[[Category: Felletar I]]
-
[[Category: Filippakopoulos, P.]]
+
[[Category: Filippakopoulos P]]
-
[[Category: Knapp, S.]]
+
[[Category: Knapp S]]
-
[[Category: Picaud, S.]]
+
[[Category: Picaud S]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Von Delft F]]
-
[[Category: Brd4]]
+
-
[[Category: Bromodomain containing protein 4]]
+
-
[[Category: Bromodomain-containing protein 4 isoform long]]
+
-
[[Category: Cap]]
+
-
[[Category: Hunk1]]
+
-
[[Category: Mcap]]
+
-
[[Category: Mitotic chromosome associated protein]]
+
-
[[Category: Sgc]]
+
-
[[Category: Signaling protein-inhibitor complex]]
+
-
[[Category: Structural genomics consortium]]
+

Current revision

Crystal Structure of the first bromodomain of human BRD4 in complex with Midazolam

PDB ID 3u5k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools