3qy0
From Proteopedia
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| - | {{STRUCTURE_3qy0| PDB=3qy0 | SCENE= }} | ||
| - | ===Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP=== | ||
| - | {{ABSTRACT_PUBMED_22284390}} | ||
| - | == | + | ==Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP== |
| - | [[ | + | <StructureSection load='3qy0' size='340' side='right'caption='[[3qy0]], [[Resolution|resolution]] 1.60Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3qy0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QY0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QY0 FirstGlance]. <br> |
| - | [[3qy0]] is a 1 chain structure with sequence from [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qy0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qy0 OCA], [https://pdbe.org/3qy0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qy0 RCSB], [https://www.ebi.ac.uk/pdbsum/3qy0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qy0 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/BIOD_HELPY BIOD_HELPY] Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (By similarity).[HAMAP-Rule:MF_00336] | ||
==See Also== | ==See Also== | ||
| - | *[[Dethiobiotin synthetase|Dethiobiotin synthetase]] | + | *[[Dethiobiotin synthetase 3D structures|Dethiobiotin synthetase 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
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[[Category: Helicobacter pylori 26695]] | [[Category: Helicobacter pylori 26695]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Chruszcz M]] |
| - | [[Category: | + | [[Category: Joachimiak A]] |
| - | [[Category: | + | [[Category: Klimecka MM]] |
| - | [[Category: Minor | + | [[Category: Minor W]] |
| - | [[Category: Murzyn | + | [[Category: Murzyn K]] |
| - | [[Category: Porebski | + | [[Category: Porebski PJ]] |
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Current revision
Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with GDP
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