This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4dsl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:44, 14 March 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4dsl| PDB=4dsl | SCENE= }}
 
-
===Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium===
 
-
==About this Structure==
+
==Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium==
-
[[4dsl]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DSL OCA].
+
<StructureSection load='4dsl' size='340' side='right'caption='[[4dsl]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
[[Category: DNA-directed DNA polymerase]]
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4dsl]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DSL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DSL FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dsl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dsl OCA], [https://pdbe.org/4dsl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dsl RCSB], [https://www.ebi.ac.uk/pdbsum/4dsl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dsl ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/E1C9K5_GEOSE E1C9K5_GEOSE]
 +
 
 +
==See Also==
 +
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Abdur, R.]]
+
[[Category: Large Structures]]
-
[[Category: Caton-Willians, J.]]
+
[[Category: Abdur R]]
-
[[Category: Gan, J H.]]
+
[[Category: Caton-Willians J]]
-
[[Category: Huang, Z.]]
+
[[Category: Gan JH]]
-
[[Category: Liu, H H.]]
+
[[Category: Huang Z]]
-
[[Category: Sheng, J.]]
+
[[Category: Liu HH]]
-
[[Category: Soares, A S.]]
+
[[Category: Sheng J]]
-
[[Category: Base stacking]]
+
[[Category: Soares AS]]
-
[[Category: Blunt end extension]]
+
-
[[Category: Dna polymerase]]
+
-
[[Category: Dna synthesis]]
+
-
[[Category: Polymerization fidelity]]
+
-
[[Category: Purine selectivity]]
+
-
[[Category: Pyrophosphorolysis]]
+
-
[[Category: Transferase-dna complex]]
+

Current revision

Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus with duplex DNA and Calcium

PDB ID 4dsl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4dsl"
Personal tools