4dxx
From Proteopedia
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| - | {{STRUCTURE_4dxx| PDB=4dxx | SCENE= }} | ||
| - | ===TGT K52M mutant crystallized at pH 8.5=== | ||
| - | == | + | ==TGT K52M mutant crystallized at pH 8.5== |
| - | [[http://www.uniprot.org/uniprot/TGT_ZYMMO TGT_ZYMMO | + | <StructureSection load='4dxx' size='340' side='right'caption='[[4dxx]], [[Resolution|resolution]] 1.66Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4dxx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zymomonas_mobilis Zymomonas mobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DXX FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dxx OCA], [https://pdbe.org/4dxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dxx RCSB], [https://www.ebi.ac.uk/pdbsum/4dxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dxx ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TGT_ZYMMO TGT_ZYMMO] Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).[HAMAP-Rule:MF_00168] | ||
| - | == | + | ==See Also== |
| - | [[ | + | *[[TRNA-guanine transglycosylase 3D structures|TRNA-guanine transglycosylase 3D structures]] |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Zymomonas mobilis]] | [[Category: Zymomonas mobilis]] | ||
| - | [[Category: Heine | + | [[Category: Heine A]] |
| - | [[Category: Jakobi | + | [[Category: Jakobi S]] |
| - | [[Category: Klebe | + | [[Category: Klebe G]] |
| - | [[Category: Ritschel | + | [[Category: Ritschel T]] |
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Current revision
TGT K52M mutant crystallized at pH 8.5
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