This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3jr1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:27, 24 July 2019) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3jr1| PDB=3jr1 | SCENE= }}
 
-
===Crystal structure of Putative fructosamine-3-kinase (YP_719053.1) from HAEMOPHILUS SOMNUS 129PT at 2.32 A resolution===
 
-
==About this Structure==
+
==Crystal structure of Putative fructosamine-3-kinase (YP_719053.1) from HAEMOPHILUS SOMNUS 129PT at 2.32 A resolution==
-
[[3jr1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_somnus_129pt Haemophilus somnus 129pt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JR1 OCA].
+
<StructureSection load='3jr1' size='340' side='right'caption='[[3jr1]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
-
[[Category: Haemophilus somnus 129pt]]
+
== Structural highlights ==
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<table><tr><td colspan='2'>[[3jr1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haes1 Haes1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JR1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JR1 FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HS_0843, YP_719053.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=205914 HAES1])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jr1 OCA], [http://pdbe.org/3jr1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3jr1 RCSB], [http://www.ebi.ac.uk/pdbsum/3jr1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3jr1 ProSAT], [http://www.topsan.org/Proteins/JCSG/3jr1 TOPSAN]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/3jr1_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jr1 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Haes1]]
 +
[[Category: Large Structures]]
 +
[[Category: Structural genomic]]
[[Category: Fructosamine kinase]]
[[Category: Fructosamine kinase]]
[[Category: Jcsg]]
[[Category: Jcsg]]
-
[[Category: Joint center for structural genomic]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
[[Category: Putative fructosamine-3-kinase]]
[[Category: Putative fructosamine-3-kinase]]
-
[[Category: Structural genomic]]
 
[[Category: Transferase]]
[[Category: Transferase]]
[[Category: Yp_719053 1]]
[[Category: Yp_719053 1]]

Current revision

Crystal structure of Putative fructosamine-3-kinase (YP_719053.1) from HAEMOPHILUS SOMNUS 129PT at 2.32 A resolution

PDB ID 3jr1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools