This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3juq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:13, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3juq| PDB=3juq | SCENE= }}
 
-
===Crystal Structure of PhzA/B from Burkholderia cepacia R18194 cocrystallized with 2 mM racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid===
 
-
==About this Structure==
+
==Crystal Structure of PhzA/B from Burkholderia cepacia R18194 cocrystallized with 2 mM racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid==
-
[[3juq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_sp. Burkholderia sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JUQ OCA].
+
<StructureSection load='3juq' size='340' side='right'caption='[[3juq]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[3juq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_lata Burkholderia lata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JUQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JUQ FirstGlance]. <br>
-
<ref group="xtra">PMID:019876985</ref><ref group="xtra">PMID:019053436</ref><references group="xtra"/><references/>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
[[Category: Burkholderia sp.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AJD:5-BROMO-2-[(3R)-PIPERIDIN-3-YLAMINO]BENZOIC+ACID'>AJD</scene>, <scene name='pdbligand=AKD:5-BROMO-2-[(3S)-PIPERIDIN-3-YLAMINO]BENZOATE'>AKD</scene></td></tr>
-
[[Category: Blankenfeldt, W.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3juq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3juq OCA], [https://pdbe.org/3juq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3juq RCSB], [https://www.ebi.ac.uk/pdbsum/3juq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3juq ProSAT]</span></td></tr>
-
[[Category: Breinbauer, R.]]
+
</table>
-
[[Category: Mentel, M.]]
+
== Function ==
-
[[Category: Biosynthetic protein]]
+
[https://www.uniprot.org/uniprot/Q396C9_BURL3 Q396C9_BURL3]
-
[[Category: Chirality]]
+
== Evolutionary Conservation ==
-
[[Category: Drug design]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Phenazine biosynthesis]]
+
Check<jmol>
-
[[Category: Racemate]]
+
<jmolCheckbox>
-
[[Category: Racemic mixture]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ju/3juq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3juq ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Burkholderia lata]]
 +
[[Category: Large Structures]]
 +
[[Category: Blankenfeldt W]]
 +
[[Category: Breinbauer R]]
 +
[[Category: Mentel M]]

Current revision

Crystal Structure of PhzA/B from Burkholderia cepacia R18194 cocrystallized with 2 mM racemic 5-bromo-2-(piperidin-3-ylamino)benzoic acid

PDB ID 3juq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools