3jy6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3jy6" [edit=sysop:move=sysop])
Current revision (10:14, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3jy6| PDB=3jy6 | SCENE= }}
 
-
===Crystal structure of LacI Transcriptional regulator from Lactobacillus brevis===
 
-
==About this Structure==
+
==Crystal structure of LacI Transcriptional regulator from Lactobacillus brevis==
-
[[3jy6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis Lactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JY6 OCA].
+
<StructureSection load='3jy6' size='340' side='right'caption='[[3jy6]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
-
[[Category: Lactobacillus brevis]]
+
== Structural highlights ==
-
[[Category: Burley, S K.]]
+
<table><tr><td colspan='2'>[[3jy6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis_ATCC_367 Levilactobacillus brevis ATCC 367]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JY6 FirstGlance]. <br>
-
[[Category: Ibrahim, B Syed.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-
[[Category: Kumaran, D.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jy6 OCA], [https://pdbe.org/3jy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jy6 RCSB], [https://www.ebi.ac.uk/pdbsum/3jy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jy6 ProSAT]</span></td></tr>
-
[[Category: Swaminathan, S.]]
+
</table>
-
[[Category: 11238g]]
+
== Function ==
-
[[Category: Dna-binding]]
+
[https://www.uniprot.org/uniprot/Q03T70_LEVBA Q03T70_LEVBA]
-
[[Category: Lac i]]
+
== Evolutionary Conservation ==
-
[[Category: New york sgx research center for structural genomic]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Nysgxrc]]
+
Check<jmol>
-
[[Category: Protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: Psi-ii]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jy/3jy6_consurf.spt"</scriptWhenChecked>
-
[[Category: Structural genomic]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Transcription]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Transcription regulation]]
+
</jmolCheckbox>
-
[[Category: Transcription regulator]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jy6 ConSurf].
-
[[Category: Transcriptional regulator]]
+
<div style="clear:both"></div>
 +
 
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Levilactobacillus brevis ATCC 367]]
 +
[[Category: Burley SK]]
 +
[[Category: Kumaran D]]
 +
[[Category: Swaminathan S]]
 +
[[Category: Syed Ibrahim B]]

Current revision

Crystal structure of LacI Transcriptional regulator from Lactobacillus brevis

PDB ID 3jy6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools