3jr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:19, 30 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3jr7| PDB=3jr7 | SCENE= }}
 
-
===The crystal structure of the protein of DegV family COG1307 with unknown function from Ruminococcus gnavus ATCC 29149===
 
-
==About this Structure==
+
==The crystal structure of the protein of DegV family COG1307 with unknown function from Ruminococcus gnavus ATCC 29149==
-
[[3jr7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruminococcus_gnavus_atcc_29149 Ruminococcus gnavus atcc 29149]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JR7 OCA].
+
<StructureSection load='3jr7' size='340' side='right'caption='[[3jr7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Ruminococcus gnavus atcc 29149]]
+
== Structural highlights ==
-
[[Category: Clancy, S.]]
+
<table><tr><td colspan='2'>[[3jr7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminococcus_gnavus_ATCC_29149 Ruminococcus gnavus ATCC 29149]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JR7 FirstGlance]. <br>
-
[[Category: Hatzos, C.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PG6:1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE'>PG6</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jr7 OCA], [https://pdbe.org/3jr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jr7 RCSB], [https://www.ebi.ac.uk/pdbsum/3jr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jr7 ProSAT]</span></td></tr>
-
[[Category: Zhang, R.]]
+
</table>
-
[[Category: Degv family]]
+
== Function ==
-
[[Category: Mcsg]]
+
[https://www.uniprot.org/uniprot/A7B6P0_MEDG7 A7B6P0_MEDG7] May bind long-chain fatty acids, such as palmitate, and may play a role in lipid transport or fatty acid metabolism.[ARBA:ARBA00003238]
-
[[Category: Midwest center for structural genomic]]
+
== Evolutionary Conservation ==
-
[[Category: Protein structure initiative]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Psi2]]
+
Check<jmol>
-
[[Category: Structural genomic]]
+
<jmolCheckbox>
-
[[Category: Unknown function]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/3jr7_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jr7 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Clancy S]]
 +
[[Category: Hatzos C]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Zhang R]]

Current revision

The crystal structure of the protein of DegV family COG1307 with unknown function from Ruminococcus gnavus ATCC 29149

PDB ID 3jr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools