3k25

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3k25" [edit=sysop:move=sysop])
Current revision (01:59, 21 November 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3k25| PDB=3k25 | SCENE= }}
 
-
===Crystal Structure of Slr1438 protein from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR112===
 
-
==About this Structure==
+
==Crystal Structure of Slr1438 protein from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR112==
-
[[3k25]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K25 OCA].
+
<StructureSection load='3k25' size='340' side='right'caption='[[3k25]], [[Resolution|resolution]] 2.55&Aring;' scene=''>
-
[[Category: Synechocystis sp.]]
+
== Structural highlights ==
-
[[Category: Acton, T B.]]
+
<table><tr><td colspan='2'>[[3k25]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K25 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K25 FirstGlance]. <br>
-
[[Category: Belote, R L.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.551&#8491;</td></tr>
-
[[Category: Ciccosanti,C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
[[Category: Everett, J K.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k25 OCA], [https://pdbe.org/3k25 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k25 RCSB], [https://www.ebi.ac.uk/pdbsum/3k25 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k25 ProSAT]</span></td></tr>
-
[[Category: Hunt, J F.]]
+
</table>
-
[[Category: Kuzin, A.]]
+
== Function ==
-
[[Category: Montelione, G T.]]
+
[https://www.uniprot.org/uniprot/P73504_SYNY3 P73504_SYNY3]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
== Evolutionary Conservation ==
-
[[Category: Nair, R.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Rost, B.]]
+
Check<jmol>
-
[[Category: Sahdev, S.]]
+
<jmolCheckbox>
-
[[Category: Seetharaman, J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/3k25_consurf.spt"</scriptWhenChecked>
-
[[Category: Su, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Tong, L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Xiao, R.]]
+
</jmolCheckbox>
-
[[Category: Nesg]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3k25 ConSurf].
-
[[Category: Northeast structural genomics consortium]]
+
<div style="clear:both"></div>
-
[[Category: P73504_syny3]]
+
__TOC__
-
[[Category: Protein structure initiative]]
+
</StructureSection>
-
[[Category: Psi-2]]
+
[[Category: Large Structures]]
-
[[Category: Sgr112]]
+
[[Category: Synechocystis sp. PCC 6803]]
-
[[Category: Structural genomic]]
+
[[Category: Acton TB]]
-
[[Category: Unknown function]]
+
[[Category: Belote RL]]
 +
[[Category: Ciccosanti C]]
 +
[[Category: Everett JK]]
 +
[[Category: Hunt JF]]
 +
[[Category: Kuzin A]]
 +
[[Category: Montelione GT]]
 +
[[Category: Nair R]]
 +
[[Category: Rost B]]
 +
[[Category: Sahdev S]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Su M]]
 +
[[Category: Tong L]]
 +
[[Category: Xiao R]]

Current revision

Crystal Structure of Slr1438 protein from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR112

PDB ID 3k25

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools