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3ipi

From Proteopedia

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{{STRUCTURE_3ipi| PDB=3ipi | SCENE= }}
 
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===Crystal Structure of a Geranyltranstransferase from the Methanosarcina mazei===
 
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==Function==
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==Crystal Structure of a Geranyltranstransferase from the Methanosarcina mazei==
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[[http://www.uniprot.org/uniprot/Q8PYS1_METMA Q8PYS1_METMA]] Involved in biosynthesis of the polyprenyl side-chain of methanophenazine, an electron carrier utilized for methanogenesis. Catalyzes the condensation of isopentenyl pyrophosphate with the allylic pyrophosphates to yield geranylfarnesyl diphosphate (GFPP). It prefers geranylgeranyl diphosphate (GGPP) and farnesyl diphosphate (FPP) as allylic substrate.
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<StructureSection load='3ipi' size='340' side='right'caption='[[3ipi]]' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IPI FirstGlance]. <br>
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[[3ipi]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IPI OCA].
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ipi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ipi OCA], [https://pdbe.org/3ipi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ipi RCSB], [https://www.ebi.ac.uk/pdbsum/3ipi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ipi ProSAT]</span></td></tr>
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[[Category: Methanosarcina mazei]]
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</table>
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[[Category: Brown, A.]]
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== Evolutionary Conservation ==
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[[Category: Burley, S K.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Kumaran, D.]]
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Check<jmol>
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[[Category: Mohammed, M B.]]
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<jmolCheckbox>
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/3ipi_consurf.spt"</scriptWhenChecked>
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[[Category: Swaminathan, S.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: 11257e]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Geranyltranstransferase]]
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</jmolCheckbox>
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[[Category: Helical bundle]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ipi ConSurf].
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[[Category: Isoprene biosynthesis]]
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<div style="clear:both"></div>
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[[Category: New york sgx research center for structural genomic]]
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__TOC__
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[[Category: Nysgxrc]]
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</StructureSection>
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[[Category: Structural genomic]]
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[[Category: Large Structures]]
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[[Category: Transferase]]
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[[Category: Brown A]]
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[[Category: Burley SK]]
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[[Category: Kumaran D]]
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[[Category: Mohammed MB]]
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[[Category: Swaminathan S]]

Current revision

Crystal Structure of a Geranyltranstransferase from the Methanosarcina mazei

PDB ID 3ipi

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