This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3iq0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (03:38, 21 April 2022) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3iq0| PDB=3iq0 | SCENE= }}
 
-
===Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli===
 
-
==About this Structure==
+
==Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli==
-
[[3iq0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IQ0 OCA].
+
<StructureSection load='3iq0' size='340' side='right'caption='[[3iq0]]' scene=''>
-
[[Category: Escherichia coli o6]]
+
== Structural highlights ==
-
[[Category: Burley, S K.]]
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IQ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IQ0 FirstGlance]. <br>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iq0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iq0 OCA], [https://pdbe.org/3iq0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iq0 RCSB], [https://www.ebi.ac.uk/pdbsum/3iq0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iq0 ProSAT]</span></td></tr>
-
[[Category: Satyanarayana, L.]]
+
</table>
-
[[Category: Swaminathan, S.]]
+
== Evolutionary Conservation ==
-
[[Category: 11206g]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: D-ribose metabolic process]]
+
Check<jmol>
-
[[Category: Kinase]]
+
<jmolCheckbox>
-
[[Category: New york sgx research center for structural genomic]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iq/3iq0_consurf.spt"</scriptWhenChecked>
-
[[Category: Nysgxrc]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Pfkb family]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Protein structure initiative]]
+
</jmolCheckbox>
-
[[Category: Psi-ii]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iq0 ConSurf].
-
[[Category: Ribokinase]]
+
<div style="clear:both"></div>
-
[[Category: Ribose]]
+
__TOC__
-
[[Category: Sad]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Large Structures]]
-
[[Category: Transferase]]
+
[[Category: Burley SK]]
 +
[[Category: Satyanarayana L]]
 +
[[Category: Swaminathan S]]

Current revision

Crystal structure of a putative Ribokinase II in complex with ATP and Mg+2 from E.coli

PDB ID 3iq0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools