3jrn
From Proteopedia
(Difference between revisions)
m (Protected "3jrn" [edit=sysop:move=sysop]) |
|||
| (3 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3jrn| PDB=3jrn | SCENE= }} | ||
| - | ===Crystal structure of TIR domain from Arabidopsis Thaliana=== | ||
| - | {{ABSTRACT_PUBMED_19845004}} | ||
| - | == | + | ==Crystal structure of TIR domain from Arabidopsis Thaliana== |
| - | [[3jrn]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3jrn' size='340' side='right'caption='[[3jrn]], [[Resolution|resolution]] 2.00Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3jrn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JRN FirstGlance]. <br> |
| - | < | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARS:ARSENIC'>ARS</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jrn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrn OCA], [https://pdbe.org/3jrn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jrn RCSB], [https://www.ebi.ac.uk/pdbsum/3jrn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jrn ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TIR_ARATH TIR_ARATH] Disease resistance protein. Resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein. That triggers a defense system including the hypersensitive response, which restricts the pathogen growth (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/3jrn_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jrn ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
| - | [[Category: Chan | + | [[Category: Large Structures]] |
| - | [[Category: Low | + | [[Category: Chan SL]] |
| - | [[Category: Mukasa | + | [[Category: Low LY]] |
| - | [[Category: Pascual | + | [[Category: Mukasa T]] |
| - | [[Category: Santelli | + | [[Category: Pascual J]] |
| - | + | [[Category: Santelli E]] | |
| - | + | ||
Current revision
Crystal structure of TIR domain from Arabidopsis Thaliana
| |||||||||||
