3ip1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:57, 21 November 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3ip1| PDB=3ip1 | SCENE= }}
 
-
===Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima===
 
-
==About this Structure==
+
==Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima==
-
[[3ip1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IP1 OCA].
+
<StructureSection load='3ip1' size='340' side='right'caption='[[3ip1]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
-
[[Category: Thermotoga maritima]]
+
== Structural highlights ==
-
[[Category: Almo, S C.]]
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IP1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IP1 FirstGlance]. <br>
-
[[Category: Burley, S K.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Ramagopal, U A.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ip1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ip1 OCA], [https://pdbe.org/3ip1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ip1 RCSB], [https://www.ebi.ac.uk/pdbsum/3ip1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ip1 ProSAT]</span></td></tr>
-
[[Category: Toro, R.]]
+
</table>
-
[[Category: Alcohol dehydrogenase]]
+
== Evolutionary Conservation ==
-
[[Category: Metal-binding]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: New york sgx research center for structural genomic]]
+
Check<jmol>
-
[[Category: Nysgxrc]]
+
<jmolCheckbox>
-
[[Category: Oxidoreductase]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/3ip1_consurf.spt"</scriptWhenChecked>
-
[[Category: Protein structure initiative]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Psi-2]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Structural genomic]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ip1 ConSurf].
 +
<div style="clear:both"></div>
 +
 
 +
==See Also==
 +
*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Almo SC]]
 +
[[Category: Burley SK]]
 +
[[Category: Ramagopal UA]]
 +
[[Category: Toro R]]

Current revision

Structure of putative alcohol dehydrogenase (TM_042) from Thermotoga maritima

PDB ID 3ip1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ip1"
Personal tools