3jtq
From Proteopedia
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| - | {{STRUCTURE_3jtq| PDB=3jtq | SCENE= }} | ||
| - | ===Mutations in Cephalosporin Acylase Affecting Stability and Autoproteolysis=== | ||
| - | {{ABSTRACT_PUBMED_19800869}} | ||
| - | == | + | ==Mutations in Cephalosporin Acylase Affecting Stability and Autoproteolysis== |
| - | [[3jtq]] is a 2 chain structure with sequence from [ | + | <StructureSection load='3jtq' size='340' side='right'caption='[[3jtq]], [[Resolution|resolution]] 2.20Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3jtq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._GK16 Pseudomonas sp. GK16]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JTQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JTQ FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jtq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jtq OCA], [https://pdbe.org/3jtq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jtq RCSB], [https://www.ebi.ac.uk/pdbsum/3jtq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jtq ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A4ZVL3_PSEU7 A4ZVL3_PSEU7] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jt/3jtq_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jtq ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Cephalosporin acylase (CA), a member of the N-terminal nucleophile hydrolase family, is activated through two steps of intramolecular autoproteolysis, the first mediated by a serine residue, and the second by a glutamate, which releases the pro-segment and produces an active enzyme. In this study, we have determined the crystal structures of mutants which could affect primary or secondary auto-cleavage and of sequential intermediates of a slow-processing mutant at 2.0-2.5A resolutions. The pro-segments of the mutants undergo dynamic conformational changes during activation and adopt surprisingly different loop conformations from one another. However, the autoproteolytic site was found to form a catalytically competent conformation with a solvent water molecule, which was essentially conserved in the CA mutants. | ||
| - | + | Structural features of cephalosporin acylase reveal the basis of autocatalytic activation.,Cho KJ, Kim JK, Lee JH, Shin HJ, Park SS, Kim KH Biochem Biophys Res Commun. 2009 Dec 11;390(2):342-8. Epub 2009 Oct 2. PMID:19800869<ref>PMID:19800869</ref> | |
| - | <ref | + | |
| - | [[Category: | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | [[Category: Pseudomonas sp.]] | + | </div> |
| - | [[Category: Cho | + | <div class="pdbe-citations 3jtq" style="background-color:#fffaf0;"></div> |
| - | [[Category: Kim | + | |
| - | [[Category: Kim | + | ==See Also== |
| - | [[Category: Lee | + | *[[Cephalosporin acylase 3D structures|Cephalosporin acylase 3D structures]] |
| - | [[Category: Park | + | == References == |
| - | [[Category: Shin | + | <references/> |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Large Structures]] | |
| + | [[Category: Pseudomonas sp. GK16]] | ||
| + | [[Category: Cho KJ]] | ||
| + | [[Category: Kim JK]] | ||
| + | [[Category: Kim KH]] | ||
| + | [[Category: Lee JH]] | ||
| + | [[Category: Park SS]] | ||
| + | [[Category: Shin HJ]] | ||
Current revision
Mutations in Cephalosporin Acylase Affecting Stability and Autoproteolysis
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Categories: Large Structures | Pseudomonas sp. GK16 | Cho KJ | Kim JK | Kim KH | Lee JH | Park SS | Shin HJ

