3ir9
From Proteopedia
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| - | {{STRUCTURE_3ir9| PDB=3ir9 | SCENE= }} | ||
| - | ===C-terminal domain of Peptide Chain Release Factor from Methanosarcina mazei.=== | ||
| - | == | + | ==C-terminal domain of Peptide Chain Release Factor from Methanosarcina mazei.== |
| - | [[http://www.uniprot.org/uniprot/RF1_METMA RF1_METMA | + | <StructureSection load='3ir9' size='340' side='right'caption='[[3ir9]], [[Resolution|resolution]] 2.21Å' scene=''> |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3ir9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanosarcina_mazei Methanosarcina mazei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IR9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IR9 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.207Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ir9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ir9 OCA], [https://pdbe.org/3ir9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ir9 RCSB], [https://www.ebi.ac.uk/pdbsum/3ir9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ir9 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RF1_METMA RF1_METMA] Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ir/3ir9_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ir9 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Methanosarcina mazei]] | [[Category: Methanosarcina mazei]] | ||
| - | [[Category: Freeman | + | [[Category: Freeman L]] |
| - | [[Category: Joachimiak | + | [[Category: Joachimiak A]] |
| - | + | [[Category: Osipiuk J]] | |
| - | [[Category: Osipiuk | + | [[Category: Rakowski E]] |
| - | [[Category: Rakowski | + | |
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Current revision
C-terminal domain of Peptide Chain Release Factor from Methanosarcina mazei.
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