2dqw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:28, 25 October 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2dqw.jpg|left|200px]]<br /><applet load="2dqw" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2dqw, resolution 1.65&Aring;" />
 
-
'''Crystal Structure of Dihydropteroate Synthase (FolP) from Thermus thermophilus HB8'''<br />
 
-
==About this Structure==
+
==Crystal Structure of Dihydropteroate Synthase (FolP) from Thermus thermophilus HB8==
-
2DQW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Active as [http://en.wikipedia.org/wiki/Dihydropteroate_synthase Dihydropteroate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.15 2.5.1.15] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQW OCA].
+
<StructureSection load='2dqw' size='340' side='right'caption='[[2dqw]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
[[Category: Dihydropteroate synthase]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2dqw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DQW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DQW FirstGlance]. <br>
-
[[Category: Thermus thermophilus]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
[[Category: Bagautdinov, B.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dqw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dqw OCA], [https://pdbe.org/2dqw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dqw RCSB], [https://www.ebi.ac.uk/pdbsum/2dqw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dqw ProSAT], [https://www.topsan.org/Proteins/RSGI/2dqw TOPSAN]</span></td></tr>
-
[[Category: Kunishima, N.]]
+
</table>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
== Function ==
-
[[Category: dihydropteroate synthase]]
+
[https://www.uniprot.org/uniprot/Q5SLV2_THET8 Q5SLV2_THET8] DHPS catalyzes the formation of the immediate precursor of folic acid.[RuleBase:RU361205]
-
[[Category: dimer]]
+
== Evolutionary Conservation ==
-
[[Category: national project on protein structural and functional analyses]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: nppsfa]]
+
Check<jmol>
-
[[Category: riken structural genomics/proteomics initiative]]
+
<jmolCheckbox>
-
[[Category: rsgi]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/2dqw_consurf.spt"</scriptWhenChecked>
-
[[Category: structural genomics]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: x-ray diffraction]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dqw ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:01:37 2008''
+
==See Also==
 +
*[[Dihydropteroate synthase 3D structures|Dihydropteroate synthase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermus thermophilus HB8]]
 +
[[Category: Bagautdinov B]]
 +
[[Category: Kunishima N]]

Current revision

Crystal Structure of Dihydropteroate Synthase (FolP) from Thermus thermophilus HB8

PDB ID 2dqw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools