3zf1
From Proteopedia
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- | {{STRUCTURE_3zf1| PDB=3zf1 | SCENE= }} | ||
- | ===Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81N mutant with dUpNHpp).=== | ||
- | {{ABSTRACT_PUBMED_23333307}} | ||
- | == | + | ==Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81N mutant with dUpNHpp).== |
- | [[3zf1]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3zf1' size='340' side='right'caption='[[3zf1]], [[Resolution|resolution]] 3.00Å' scene=''> |
- | [[ | + | == Structural highlights == |
- | [[ | + | <table><tr><td colspan='2'>[[3zf1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_virus_80alpha Staphylococcus virus 80alpha]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZF1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZF1 FirstGlance]. <br> |
- | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> |
- | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr> |
- | [[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zf1 OCA], [https://pdbe.org/3zf1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zf1 RCSB], [https://www.ebi.ac.uk/pdbsum/3zf1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zf1 ProSAT]</span></td></tr> |
- | [ | + | </table> |
- | [[Category: | + | == Function == |
- | [[Category: | + | [https://www.uniprot.org/uniprot/A4ZF98_9CAUD A4ZF98_9CAUD] |
- | [[Category: | + | <div style="background-color:#fffaf0;"> |
- | [[Category: | + | == Publication Abstract from PubMed == |
- | [[Category: | + | dUTPases (Duts) have emerged as promising regulatory molecules controlling relevant cellular processes. However, the mechanism underlying this regulatory function remains enigmatic. Using staphylococcal pathogenicity island (SaPI) repression as a model, we report here that phage Duts induce the transfer of SaPI-encoded virulence factors by switching between active (dUTP-bound) and inactive (apo state) conformations, a conversion catalyzed by their intrinsic dUTPase activity. Crystallographic and mutagenic analyses demonstrate that binding to dUTP reorders the C-terminal motif V of the phage-encoded Duts, rendering these proteins into the active conformation required for SaPI derepression. By contrast, the conversion to the apo state conformation by hydrolysis of the bound dUTP generates a protein that is unable to induce the SaPI cycle. Because none of the requirements involving Duts in SaPI transfer are exclusive to the phage-encoded proteins, we propose that Duts are widespread cellular regulators acting in a manner analogous to the eukaryotic G proteins. |
- | [[Category: | + | |
- | [[Category: | + | Phage dUTPases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-like Mechanism.,Tormo-Mas MA, Donderis J, Garcia-Caballer M, Alt A, Mir-Sanchis I, Marina A, Penades JR Mol Cell. 2013 Jan 15. pii: S1097-2765(12)01049-0. doi:, 10.1016/j.molcel.2012.12.013. PMID:23333307<ref>PMID:23333307</ref> |
- | [[Category: | + | |
- | [[Category: | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
+ | </div> | ||
+ | <div class="pdbe-citations 3zf1" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[DUTPase 3D structures|DUTPase 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Staphylococcus virus 80alpha]] | ||
+ | [[Category: Alt A]] | ||
+ | [[Category: Donderis J]] | ||
+ | [[Category: Garcia-Caballer M]] | ||
+ | [[Category: Marina A]] | ||
+ | [[Category: Mir-Sanchis I]] | ||
+ | [[Category: Penades JR]] | ||
+ | [[Category: Tormo-Mas MA]] |
Current revision
Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81N mutant with dUpNHpp).
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