This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2dt8
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2dt8.gif|left|200px]]<br /><applet load="2dt8" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2dt8, resolution 1.480Å" /> | ||
| - | '''Fatty Acid Binding of a DegV family Protein from Thermus thermophilus'''<br /> | ||
| - | == | + | ==Fatty Acid Binding of a DegV family Protein from Thermus thermophilus== |
| - | + | <StructureSection load='2dt8' size='340' side='right'caption='[[2dt8]], [[Resolution|resolution]] 1.48Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2dt8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DT8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DT8 FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | [[ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dt8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dt8 OCA], [https://pdbe.org/2dt8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dt8 RCSB], [https://www.ebi.ac.uk/pdbsum/2dt8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dt8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dt8 TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/2dt8_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dt8 ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thet8]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Rehse, P H]] | ||
| + | [[Category: Yokoyama, S]] | ||
| + | [[Category: Degv]] | ||
| + | [[Category: Fatty acid binding]] | ||
| + | [[Category: Lipid binding protein]] | ||
| + | [[Category: National project on protein structural and functional analyse]] | ||
| + | [[Category: Nppsfa]] | ||
| + | [[Category: Rsgi]] | ||
Current revision
Fatty Acid Binding of a DegV family Protein from Thermus thermophilus
| |||||||||||
