This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3l0d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:28, 6 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3l0d| PDB=3l0d | SCENE= }}
 
-
===Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD===
 
-
==About this Structure==
+
==Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD==
-
[[3l0d]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bartonella_henselae Bartonella henselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0D OCA].
+
<StructureSection load='3l0d' size='340' side='right'caption='[[3l0d]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3l0d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bartonella_henselae Bartonella henselae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L0D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L0D FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l0d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l0d OCA], [https://pdbe.org/3l0d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l0d RCSB], [https://www.ebi.ac.uk/pdbsum/3l0d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l0d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8L201_BARHN Q8L201_BARHN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l0/3l0d_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l0d ConSurf].
 +
<div style="clear:both"></div>
 +
 
 +
==See Also==
 +
*[[Glyceraldehyde-3-phosphate dehydrogenase 3D structures|Glyceraldehyde-3-phosphate dehydrogenase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Bartonella henselae]]
[[Category: Bartonella henselae]]
-
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
+
[[Category: Large Structures]]
-
[[Category: Als collaborative crystallography]]
+
-
[[Category: Bartonellosis]]
+
-
[[Category: Lyme disease]]
+
-
[[Category: Niaid]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Seattle structural genomics center for infectious disease]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Tick-transmitted pathogen]]
+

Current revision

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Bartonella henselae with bound NAD

PDB ID 3l0d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools