3l5z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3l5z" [edit=sysop:move=sysop])
Current revision (02:03, 21 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3l5z| PDB=3l5z | SCENE= }}
 
-
===Crystal structure of transcriptional regulator, GntR family from Bacillus cereus===
 
-
==About this Structure==
+
==Crystal structure of transcriptional regulator, GntR family from Bacillus cereus==
-
[[3l5z]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L5Z OCA].
+
<StructureSection load='3l5z' size='340' side='right'caption='[[3l5z]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
[[Category: Bacillus cereus]]
+
== Structural highlights ==
-
[[Category: Chang, C.]]
+
<table><tr><td colspan='2'>[[3l5z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_10987 Bacillus cereus ATCC 10987]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L5Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L5Z FirstGlance]. <br>
-
[[Category: Clancy, S.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
[[Category: Feldmann, B.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PG5:1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE'>PG5</scene></td></tr>
-
[[Category: Hatzos, C.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l5z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l5z OCA], [https://pdbe.org/3l5z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l5z RCSB], [https://www.ebi.ac.uk/pdbsum/3l5z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l5z ProSAT]</span></td></tr>
-
[[Category: Joachimiak, A.]]
+
</table>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
== Function ==
-
[[Category: Dna-binding]]
+
[https://www.uniprot.org/uniprot/Q734I1_BACC1 Q734I1_BACC1]
-
[[Category: Gntr family]]
+
== Evolutionary Conservation ==
-
[[Category: Mcsg]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Midwest center for structural genomic]]
+
Check<jmol>
-
[[Category: Protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: Psi-2]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l5/3l5z_consurf.spt"</scriptWhenChecked>
-
[[Category: Structural genomic]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Transcription]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Transcription regulation]]
+
</jmolCheckbox>
-
[[Category: Transcription regulator]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l5z ConSurf].
-
[[Category: Transcriptional regulator]]
+
<div style="clear:both"></div>
 +
 
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus cereus ATCC 10987]]
 +
[[Category: Large Structures]]
 +
[[Category: Chang C]]
 +
[[Category: Clancy S]]
 +
[[Category: Feldmann B]]
 +
[[Category: Hatzos C]]
 +
[[Category: Joachimiak A]]

Current revision

Crystal structure of transcriptional regulator, GntR family from Bacillus cereus

PDB ID 3l5z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools