This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3lod

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:21, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3lod| PDB=3lod | SCENE= }}
 
-
===The crystal structure of the putative acyl-CoA N-acyltransferase from Klebsiella pneumoniae subsp.pneumoniae MGH 78578===
 
-
==About this Structure==
+
==The crystal structure of the putative acyl-CoA N-acyltransferase from Klebsiella pneumoniae subsp.pneumoniae MGH 78578==
-
[[3lod]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae Klebsiella pneumoniae subsp. pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOD OCA].
+
<StructureSection load='3lod' size='340' side='right'caption='[[3lod]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
[[Category: Klebsiella pneumoniae subsp. pneumoniae]]
+
== Structural highlights ==
-
[[Category: Bearden, J.]]
+
<table><tr><td colspan='2'>[[3lod]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 Klebsiella pneumoniae subsp. pneumoniae MGH 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LOD FirstGlance]. <br>
-
[[Category: Joachimiak, A.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lod OCA], [https://pdbe.org/3lod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lod RCSB], [https://www.ebi.ac.uk/pdbsum/3lod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lod ProSAT]</span></td></tr>
-
[[Category: Volkart, L.]]
+
</table>
-
[[Category: Zhang, R.]]
+
== Function ==
-
[[Category: Acyl-coa n-acyltransferase]]
+
[https://www.uniprot.org/uniprot/A6T8Z3_KLEP7 A6T8Z3_KLEP7]
-
[[Category: Acyltransferase]]
+
== Evolutionary Conservation ==
-
[[Category: Mcsg]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Midwest center for structural genomic]]
+
Check<jmol>
-
[[Category: Protein structure initiative]]
+
<jmolCheckbox>
-
[[Category: Psi2]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lo/3lod_consurf.spt"</scriptWhenChecked>
-
[[Category: Structural genomic]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Transferase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lod ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Klebsiella pneumoniae subsp. pneumoniae MGH 78578]]
 +
[[Category: Large Structures]]
 +
[[Category: Bearden J]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Volkart L]]
 +
[[Category: Zhang R]]

Current revision

The crystal structure of the putative acyl-CoA N-acyltransferase from Klebsiella pneumoniae subsp.pneumoniae MGH 78578

PDB ID 3lod

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools