3m95

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3m95" [edit=sysop:move=sysop])
Current revision (16:31, 1 November 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3m95| PDB=3m95 | SCENE= }}
 
-
===Crystal structure of autophagy-related protein Atg8 from the silkworm Bombyx mori===
 
-
{{ABSTRACT_PUBMED_20606273}}
 
-
==About this Structure==
+
==Crystal structure of autophagy-related protein Atg8 from the silkworm Bombyx mori==
-
[[3m95]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M95 OCA].
+
<StructureSection load='3m95' size='340' side='right'caption='[[3m95]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3m95]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3M95 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3M95 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3m95 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3m95 OCA], [https://pdbe.org/3m95 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3m95 RCSB], [https://www.ebi.ac.uk/pdbsum/3m95 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3m95 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q2F5R5_BOMMO Q2F5R5_BOMMO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m9/3m95_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3m95 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Autophagy-related protein Atg8 is ubiquitous in all eukaryotes. It is involved in the Atg8-PE ubiquitin-like conjugation system, which is essential for autophagosome formation. The structures of Atg8 from different species are very similar and share a ubiquitin-fold domain at the C-terminus. In the 2.40 A crystal structure of Atg8 from the silkworm Bombyx mori reported here, the ubiquitin fold at the C-terminus is preceded by two additional helices at the N-terminus.
-
==Reference==
+
Structure of autophagy-related protein Atg8 from the silkworm Bombyx mori.,Hu C, Zhang X, Teng YB, Hu HX, Li WF Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jul 1;66(Pt, 7):787-90. Epub 2010 Jun 23. PMID:20606273<ref>PMID:20606273</ref>
-
<ref group="xtra">PMID:020606273</ref><references group="xtra"/><references/>
+
 
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3m95" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[Autophagy-related protein 3D structures|Autophagy-related protein 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Bombyx mori]]
[[Category: Bombyx mori]]
-
[[Category: Hu, C.]]
+
[[Category: Large Structures]]
-
[[Category: Hu, H X.]]
+
[[Category: Hu C]]
-
[[Category: Jiang, Y L.]]
+
[[Category: Hu H-X]]
-
[[Category: Teng, Y B.]]
+
[[Category: Jiang YL]]
-
[[Category: Zhang, X.]]
+
[[Category: Teng Y-B]]
-
[[Category: Zhou, C Z.]]
+
[[Category: Zhang X]]
-
[[Category: Alpha slash beta]]
+
[[Category: Zhou CZ]]
-
[[Category: Receptor]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of autophagy-related protein Atg8 from the silkworm Bombyx mori

PDB ID 3m95

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3m95"
Personal tools