2ehh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 23 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ehh.jpg|left|200px]]<br /><applet load="2ehh" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ehh, resolution 1.90&Aring;" />
 
-
'''Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus'''<br />
 
-
==About this Structure==
+
==Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus==
-
2EHH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Dihydrodipicolinate_synthase Dihydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.52 4.2.1.52] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EHH OCA].
+
<StructureSection load='2ehh' size='340' side='right'caption='[[2ehh]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Aquifex aeolicus]]
+
== Structural highlights ==
-
[[Category: Dihydrodipicolinate synthase]]
+
<table><tr><td colspan='2'>[[2ehh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EHH FirstGlance]. <br>
-
[[Category: Single protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Karthe, P.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
[[Category: Kumarevel, T S.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ehh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ehh OCA], [https://pdbe.org/2ehh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ehh RCSB], [https://www.ebi.ac.uk/pdbsum/2ehh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ehh ProSAT], [https://www.topsan.org/Proteins/RSGI/2ehh TOPSAN]</span></td></tr>
-
[[Category: Kuramitsu, S.]]
+
</table>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
== Function ==
-
[[Category: Yokoyama, S.]]
+
[https://www.uniprot.org/uniprot/DAPA_AQUAE DAPA_AQUAE] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA) (By similarity).
-
[[Category: PO4]]
+
== Evolutionary Conservation ==
-
[[Category: aquifex aeolicus]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: dihydrodipicolinate synthase]]
+
Check<jmol>
-
[[Category: national project on protein structural and functional analyses]]
+
<jmolCheckbox>
-
[[Category: nppsfa]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2ehh_consurf.spt"</scriptWhenChecked>
-
[[Category: riken structural genomics/proteomics initiative]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: rsgi]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: structural genomics]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ehh ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:10:03 2008''
+
==See Also==
 +
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Aquifex aeolicus]]
 +
[[Category: Large Structures]]
 +
[[Category: Karthe P]]
 +
[[Category: Kumarevel TS]]
 +
[[Category: Kuramitsu S]]
 +
[[Category: Yokoyama S]]

Current revision

Crystal structure of dihydrodipicolinate synthase from aquifex aeolicus

PDB ID 2ehh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools