This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mc8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:24, 21 February 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3mc8| PDB=3mc8 | SCENE= }}
 
-
===POTRA1-3 of the periplasmic domain of Omp85 from Anabaena===
 
-
{{ABSTRACT_PUBMED_20348103}}
 
-
==About this Structure==
+
==POTRA1-3 of the periplasmic domain of Omp85 from Anabaena==
-
[[3mc8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Nostoc_sp. Nostoc sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MC8 OCA].
+
<StructureSection load='3mc8' size='340' side='right'caption='[[3mc8]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[3mc8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_sp._PCC_7120_=_FACHB-418 Nostoc sp. PCC 7120 = FACHB-418]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MC8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MC8 FirstGlance]. <br>
-
<ref group="xtra">PMID:020348103</ref><references group="xtra"/><references/>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
-
[[Category: Nostoc sp.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mc8 OCA], [https://pdbe.org/3mc8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mc8 RCSB], [https://www.ebi.ac.uk/pdbsum/3mc8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mc8 ProSAT]</span></td></tr>
-
[[Category: Koenig, P.]]
+
</table>
-
[[Category: Schleiff, E.]]
+
== Function ==
-
[[Category: Sinning, I.]]
+
[https://www.uniprot.org/uniprot/Q8YUR6_NOSS1 Q8YUR6_NOSS1]
-
[[Category: Tews, I.]]
+
== Evolutionary Conservation ==
-
[[Category: Beta barrel biogenesis]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Membrane protein]]
+
Check<jmol>
-
[[Category: Outer bacterial membrane]]
+
<jmolCheckbox>
-
[[Category: Polypeptide transport associated]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mc/3mc8_consurf.spt"</scriptWhenChecked>
-
[[Category: Potra]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Protein membrane transport]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mc8 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Nostoc sp. PCC 7120 = FACHB-418]]
 +
[[Category: Koenig P]]
 +
[[Category: Schleiff E]]
 +
[[Category: Sinning I]]
 +
[[Category: Tews I]]

Current revision

POTRA1-3 of the periplasmic domain of Omp85 from Anabaena

PDB ID 3mc8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools