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2ekc
From Proteopedia
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| - | [[Image:2ekc.jpg|left|200px]]<br /><applet load="2ekc" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ekc, resolution 2.00Å" /> | ||
| - | '''Structural study of Project ID aq_1548 from Aquifex aeolicus VF5'''<br /> | ||
| - | == | + | ==Structural study of Project ID aq_1548 from Aquifex aeolicus VF5== |
| - | + | <StructureSection load='2ekc' size='340' side='right'caption='[[2ekc]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[2ekc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EKC FirstGlance]. <br> | |
| - | + | </td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Tryptophan_synthase Tryptophan synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.20 4.2.1.20] </span></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ekc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ekc OCA], [https://pdbe.org/2ekc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ekc RCSB], [https://www.ebi.ac.uk/pdbsum/2ekc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ekc ProSAT], [https://www.topsan.org/Proteins/RSGI/2ekc TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | [[ | + | == Function == |
| - | [[ | + | [[https://www.uniprot.org/uniprot/TRPA_AQUAE TRPA_AQUAE]] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate (By similarity). |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2ekc_consurf.spt"</scriptWhenChecked> | |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ekc ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Tryptophan synthase 3D structures|Tryptophan synthase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Aquae]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Tryptophan synthase]] | ||
| + | [[Category: Asada, Y]] | ||
| + | [[Category: Kunishima, N]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Lyase]] | ||
| + | [[Category: National project on protein structural and functional analyse]] | ||
| + | [[Category: Nppsfa]] | ||
| + | [[Category: Rsgi]] | ||
Current revision
Structural study of Project ID aq_1548 from Aquifex aeolicus VF5
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