3nav
From Proteopedia
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| - | {{STRUCTURE_3nav| PDB=3nav | SCENE= }} | ||
| - | ===Crystal structure of an alpha subunit of tryptophan synthase from Vibrio cholerae O1 biovar El Tor str. N16961=== | ||
| - | == | + | ==Crystal structure of an alpha subunit of tryptophan synthase from Vibrio cholerae O1 biovar El Tor str. N16961== |
| - | [[http://www.uniprot.org/uniprot/ | + | <StructureSection load='3nav' size='340' side='right'caption='[[3nav]], [[Resolution|resolution]] 2.10Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3nav]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NAV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NAV FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nav FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nav OCA], [https://pdbe.org/3nav PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nav RCSB], [https://www.ebi.ac.uk/pdbsum/3nav PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nav ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TRPA_VIBCH TRPA_VIBCH] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate.[HAMAP-Rule:MF_00131] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/na/3nav_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nav ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | == | + | ==See Also== |
| - | [[ | + | *[[Tryptophan synthase 3D structures|Tryptophan synthase 3D structures]] |
| - | [[Category: | + | __TOC__ |
| - | [[Category: Vibrio cholerae | + | </StructureSection> |
| - | [[Category: Anderson | + | [[Category: Large Structures]] |
| - | + | [[Category: Vibrio cholerae O1 biovar El Tor str. N16961]] | |
| - | [[Category: Joachimiak | + | [[Category: Anderson A]] |
| - | [[Category: Kwon | + | [[Category: Joachimiak A]] |
| - | [[Category: Makowska-Grzyska | + | [[Category: Kwon K]] |
| - | [[Category: Nocek | + | [[Category: Makowska-Grzyska M]] |
| - | + | [[Category: Nocek B]] | |
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Current revision
Crystal structure of an alpha subunit of tryptophan synthase from Vibrio cholerae O1 biovar El Tor str. N16961
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