This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3mlf
From Proteopedia
(Difference between revisions)
m (Protected "3mlf" [edit=sysop:move=sysop]) |
|||
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
| - | {{STRUCTURE_3mlf| PDB=3mlf | SCENE= }} | ||
| - | ===Putative transcriptional regulator from Staphylococcus aureus.=== | ||
| - | == | + | ==Putative transcriptional regulator from Staphylococcus aureus.== |
| - | [[3mlf]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <StructureSection load='3mlf' size='340' side='right' caption='[[3mlf]], [[Resolution|resolution]] 2.60Å' scene=''> |
| - | [[ | + | == Structural highlights == |
| - | [[Category: Gornicki, P | + | <table><tr><td colspan='2'>[[3mlf]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Staat Staat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MLF FirstGlance]. <br> |
| - | [[Category: Joachimiak, A | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">USA300HOU_2003 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=451516 STAAT])</td></tr> |
| - | [[Category: Osipiuk, J | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mlf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlf OCA], [http://pdbe.org/3mlf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mlf RCSB], [http://www.ebi.ac.uk/pdbsum/3mlf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mlf ProSAT]</span></td></tr> |
| - | [[Category: Tesar, C | + | </table> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ml/3mlf_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mlf ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Staat]] | ||
| + | [[Category: Gornicki, P]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Osipiuk, J]] | ||
| + | [[Category: Tesar, C]] | ||
[[Category: Helix-turn-helix xre-family like protein]] | [[Category: Helix-turn-helix xre-family like protein]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Transcription regulator]] | [[Category: Transcription regulator]] | ||
Current revision
Putative transcriptional regulator from Staphylococcus aureus.
| |||||||||||
