This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4k47
From Proteopedia
(Difference between revisions)
m (Protected "4k47" [edit=sysop:move=sysop]) |
|||
| (6 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Structure of the Streptococcus pneumoniae leucyl-tRNA synthetase editing domain bound to a benzoxaborole-AMP adduct== | |
| + | <StructureSection load='4k47' size='340' side='right'caption='[[4k47]], [[Resolution|resolution]] 2.02Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4k47]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_ATCC_700669 Streptococcus pneumoniae ATCC 700669]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K47 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K47 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.02Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=WMP:[(1R,5R,6R,8S)-6-(6-AMINOPURIN-9-YL)-3-[(R)-OXIDANYL(PHENYL)METHYL]SPIRO[2,4,7-TRIOXA-3-BORANUIDABICYCLO[3.3.0]OCTANE-3,9-8-OXA-9-BORANUIDABICYCLO[4.3.0]NONA-1,3,5-TRIENE]-8-YL]METHYL+DIHYDROGEN+PHOSPHATE'>WMP</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k47 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k47 OCA], [https://pdbe.org/4k47 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k47 RCSB], [https://www.ebi.ac.uk/pdbsum/4k47 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k47 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SYL_STRPJ SYL_STRPJ] | ||
| - | + | ==See Also== | |
| - | + | *[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]] | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Streptococcus pneumoniae ATCC 700669]] | ||
| + | [[Category: Ding YY]] | ||
| + | [[Category: Fang ZP]] | ||
| + | [[Category: Hu QH]] | ||
| + | [[Category: Liu RJ]] | ||
| + | [[Category: Pan W]] | ||
| + | [[Category: Tan M]] | ||
| + | [[Category: Wang ED]] | ||
| + | [[Category: Wang M]] | ||
| + | [[Category: Zhang J]] | ||
| + | [[Category: Zhou HC]] | ||
Current revision
Structure of the Streptococcus pneumoniae leucyl-tRNA synthetase editing domain bound to a benzoxaborole-AMP adduct
| |||||||||||
Categories: Large Structures | Streptococcus pneumoniae ATCC 700669 | Ding YY | Fang ZP | Hu QH | Liu RJ | Pan W | Tan M | Wang ED | Wang M | Zhang J | Zhou HC
