3niw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:13, 6 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3niw| PDB=3niw | SCENE= }}
 
-
===Crystal structure of a haloacid dehalogenase-like hydrolase from Bacteroides thetaiotaomicron===
 
-
==About this Structure==
+
==Crystal structure of a haloacid dehalogenase-like hydrolase from Bacteroides thetaiotaomicron==
-
[[3niw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIW OCA].
+
<StructureSection load='3niw' size='340' side='right'caption='[[3niw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3niw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NIW FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3niw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3niw OCA], [https://pdbe.org/3niw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3niw RCSB], [https://www.ebi.ac.uk/pdbsum/3niw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3niw ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8A2F3_BACTN Q8A2F3_BACTN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/3niw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3niw ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacteroides thetaiotaomicron]]
[[Category: Bacteroides thetaiotaomicron]]
-
[[Category: Almo, S C.]]
+
[[Category: Large Structures]]
-
[[Category: Bain, K T.]]
+
[[Category: Almo SC]]
-
[[Category: Bonanno, J B.]]
+
[[Category: Bain KT]]
-
[[Category: Burley, S K.]]
+
[[Category: Bonanno JB]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Burley SK]]
-
[[Category: Ramagopal, U.]]
+
[[Category: Ramagopal U]]
-
[[Category: Rutter, M.]]
+
[[Category: Rutter M]]
-
[[Category: Sauder, J M.]]
+
[[Category: Sauder JM]]
-
[[Category: Toro, R.]]
+
[[Category: Toro R]]
-
[[Category: Wu, B.]]
+
[[Category: Wu B]]
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of a haloacid dehalogenase-like hydrolase from Bacteroides thetaiotaomicron

PDB ID 3niw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools