3o2g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3o2g" [edit=sysop:move=sysop])
Current revision (10:32, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3o2g| PDB=3o2g | SCENE= }}
 
-
===Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)===
 
-
{{ABSTRACT_PUBMED_021168767}}
 
-
==About this Structure==
+
==Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)==
-
[[3o2g]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O2G OCA].
+
<StructureSection load='3o2g' size='340' side='right'caption='[[3o2g]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
-
[[Category: Gamma-butyrobetaine dioxygenase]]
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3o2g]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3O2G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3O2G FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NM2:3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM'>NM2</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3o2g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3o2g OCA], [https://pdbe.org/3o2g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3o2g RCSB], [https://www.ebi.ac.uk/pdbsum/3o2g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3o2g ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BODG_HUMAN BODG_HUMAN] Catalyzes the formation of L-carnitine from gamma-butyrobetaine.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o2/3o2g_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3o2g ConSurf].
 +
<div style="clear:both"></div>
 +
 
 +
==See Also==
 +
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Large Structures]]
-
[[Category: Bountra, C.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Claridge, T D.W.]]
+
[[Category: Bountra C]]
-
[[Category: Delft, F von.]]
+
[[Category: Claridge TDW]]
-
[[Category: Edwards, A.]]
+
[[Category: Edwards A]]
-
[[Category: Filippakopoulos, P.]]
+
[[Category: Filippakopoulos P]]
-
[[Category: Henry, L.]]
+
[[Category: Henry L]]
-
[[Category: Kavanagh, K L.]]
+
[[Category: Kavanagh KL]]
-
[[Category: Kochan, G.]]
+
[[Category: Kochan G]]
-
[[Category: Krojer, T.]]
+
[[Category: Krojer T]]
-
[[Category: Leung, I K.H.]]
+
[[Category: Leung IKH]]
-
[[Category: McDonough, M A.]]
+
[[Category: McDonough MA]]
-
[[Category: Muniz, J.]]
+
[[Category: Muniz J]]
-
[[Category: Oppermann, U.]]
+
[[Category: Oppermann U]]
-
[[Category: Pilka, E.]]
+
[[Category: Pilka E]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Schofield CJ]]
-
[[Category: Schofield, C J.]]
+
[[Category: Ugochukwu E]]
-
[[Category: Ugochukwu, E.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Von Delft F]]
-
[[Category: 2-oxoglutarate dioxygenase 1]]
+
-
[[Category: Gamma-butyrobetaine]]
+
-
[[Category: Gamma-butyrobetaine hydroxylase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics consortium]]
+

Current revision

Crystal Structure of Human gamma-butyrobetaine,2-oxoglutarate dioxygenase 1 (BBOX1)

PDB ID 3o2g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3o2g"
Personal tools