3nt8

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{{STRUCTURE_3nt8| PDB=3nt8 | SCENE= }}
 
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===Crystal Structure of Na-ASP-1===
 
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{{ABSTRACT_PUBMED_21543848}}
 
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==About this Structure==
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==Crystal Structure of Na-ASP-1==
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[[3nt8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Necator_americanus Necator americanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NT8 OCA].
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<StructureSection load='3nt8' size='340' side='right'caption='[[3nt8]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3nt8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Necator_americanus Necator americanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NT8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NT8 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nt8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nt8 OCA], [https://pdbe.org/3nt8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nt8 RCSB], [https://www.ebi.ac.uk/pdbsum/3nt8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nt8 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/O76744_NECAM O76744_NECAM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Major proteins secreted by the infective larval stage hookworms upon host entry include Ancylostoma secreted proteins (ASPs), which are characterized by one or two CAP (cysteine-rich secretory protein/antigen 5/pathogenesis related-1) domains. The CAP domain has been reported in diverse phylogenetically unrelated proteins, but has no confirmed function. The first structure of a two-CAP-domain protein, Na-ASP-1, from the major human hookworm parasite Necator americanus was refined to a resolution limit of 2.2 A. The structure was solved by molecular replacement (MR) using Na-ASP-2, a one-CAP-domain ASP, as the search model. The correct MR solution could only be obtained by truncating the polyalanine model of Na-ASP-2 and removing several loops. The structure reveals two CAP domains linked by an extended loop. Overall, the carboxyl-terminal CAP domain is more similar to Na-ASP-2 than to the amino-terminal CAP domain. A large central cavity extends from the amino-terminal CAP domain to the carboxyl-terminal CAP domain, encompassing the putative CAP-binding cavity. The putative CAP-binding cavity is a characteristic cavity in the carboxyl-terminal CAP domain that contains a His and Glu pair. These residues are conserved in all single-CAP-domain proteins, but are absent in the amino-terminal CAP domain. The conserved His residues are oriented such that they appear to be capable of directly coordinating a zinc ion as observed for CAP proteins from reptile venoms. This first structure of a two-CAP-domain ASP can serve as a template for homology modeling of other two-CAP-domain proteins.
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==Reference==
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Structure of a two-CAP-domain protein from the human hookworm parasite Necator americanus.,Asojo OA Acta Crystallogr D Biol Crystallogr. 2011 May;67(Pt 5):455-62. Epub 2011, Apr 7. PMID:21543848<ref>PMID:21543848</ref>
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<ref group="xtra">PMID:021543848</ref><references group="xtra"/><references/>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3nt8" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Necator americanus]]
[[Category: Necator americanus]]
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[[Category: Asojo, O A.]]
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[[Category: Asojo OA]]
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[[Category: Cap domain]]
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[[Category: Cysteine-rich secretory protein]]
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[[Category: Immune system]]
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[[Category: Pathogenesis related-1 protein]]
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Current revision

Crystal Structure of Na-ASP-1

PDB ID 3nt8

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