3nix

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3nix" [edit=sysop:move=sysop])
Current revision (06:32, 27 November 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_3nix| PDB=3nix | SCENE= }}
 
-
===Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.===
 
-
==About this Structure==
+
==Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.==
-
[[3nix]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Cytophaga_hutchinsonii Cytophaga hutchinsonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIX OCA].
+
<StructureSection load='3nix' size='340' side='right'caption='[[3nix]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
[[Category: Cytophaga hutchinsonii]]
+
== Structural highlights ==
-
[[Category: Acton, T B.]]
+
<table><tr><td colspan='2'>[[3nix]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Cytophaga_hutchinsonii_ATCC_33406 Cytophaga hutchinsonii ATCC 33406]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NIX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NIX FirstGlance]. <br>
-
[[Category: Ciccosanti, C.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
[[Category: Everett, J K.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Foote, E L.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nix OCA], [https://pdbe.org/3nix PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nix RCSB], [https://www.ebi.ac.uk/pdbsum/3nix PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nix ProSAT]</span></td></tr>
-
[[Category: Hunt, J F.]]
+
</table>
-
[[Category: Maglaqui, M.]]
+
== Evolutionary Conservation ==
-
[[Category: Montelione, G T.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
Check<jmol>
-
[[Category: Nair, R.]]
+
<jmolCheckbox>
-
[[Category: Rost, B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/3nix_consurf.spt"</scriptWhenChecked>
-
[[Category: Sahdev, S.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Seetharaman, J.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Su, M.]]
+
</jmolCheckbox>
-
[[Category: Tong, L.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nix ConSurf].
-
[[Category: Vorobiev, S.]]
+
<div style="clear:both"></div>
-
[[Category: Xiao, R.]]
+
__TOC__
-
[[Category: Dehydrogenase]]
+
</StructureSection>
-
[[Category: Flavoprotein]]
+
[[Category: Cytophaga hutchinsonii ATCC 33406]]
-
[[Category: Nesg]]
+
[[Category: Large Structures]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Acton TB]]
-
[[Category: Oxidoreductase]]
+
[[Category: Ciccosanti C]]
-
[[Category: Protein structure initiative]]
+
[[Category: Everett JK]]
-
[[Category: Psi-2]]
+
[[Category: Foote EL]]
-
[[Category: Structural genomic]]
+
[[Category: Hunt JF]]
 +
[[Category: Maglaqui M]]
 +
[[Category: Montelione GT]]
 +
[[Category: Nair R]]
 +
[[Category: Rost B]]
 +
[[Category: Sahdev S]]
 +
[[Category: Seetharaman J]]
 +
[[Category: Su M]]
 +
[[Category: Tong L]]
 +
[[Category: Vorobiev S]]
 +
[[Category: Xiao R]]

Current revision

Crystal structure of flavoprotein/dehydrogenase from Cytophaga hutchinsonii. Northeast Structural Genomics Consortium Target ChR43.

PDB ID 3nix

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3nix"
Personal tools