2fbl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:22, 14 February 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fbl.gif|left|200px]]<br /><applet load="2fbl" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2fbl, resolution 1.90&Aring;" />
 
-
'''The crystal structure of the hypothetical protein NE1496'''<br />
 
-
==About this Structure==
+
==The crystal structure of the hypothetical protein NE1496==
-
2FBL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea] with <scene name='pdbligand=NA:'>NA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FBL OCA].
+
<StructureSection load='2fbl' size='340' side='right'caption='[[2fbl]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2fbl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FBL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FBL FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fbl OCA], [https://pdbe.org/2fbl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fbl RCSB], [https://www.ebi.ac.uk/pdbsum/2fbl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fbl ProSAT], [https://www.topsan.org/Proteins/MCSG/2fbl TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/3PASE_NITEU 3PASE_NITEU] Involved in the hydrolysis of the beta-gamma-phosphoanhydride linkage of triphosphate-containing substrates (inorganic or nucleoside-linked). Catalyzes the hydrolysis of inorganic triphosphate (PPPi). The enzyme has a strong preference for linear PPPi compared with cyclic PPPi (cyclic trimetaphosphate) and to the linear P4. The longer chains polyphosphate are not hydrolyzed. It has only a slight thiamine triphosphatase (ThTPase) activity. Nucleoside triphosphatase activity is negligible in the presence of magnesium, but a small activity is observed in the presence of manganese, in particular with GTP.<ref>PMID:21840996</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fb/2fbl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fbl ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Nitrosomonas europaea]]
[[Category: Nitrosomonas europaea]]
-
[[Category: Single protein]]
+
[[Category: Binkowski TA]]
-
[[Category: Binkowski, T A.]]
+
[[Category: Edwards AM]]
-
[[Category: Edwards, A M.]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Lunin VV]]
-
[[Category: Lunin, V V.]]
+
[[Category: Onopriyenko O]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Savchenko A]]
-
[[Category: Onopriyenko, O.]]
+
[[Category: Skarina T]]
-
[[Category: Savchenko, A.]]
+
-
[[Category: Skarina, T.]]
+
-
[[Category: NA]]
+
-
[[Category: apc5855]]
+
-
[[Category: mcsg]]
+
-
[[Category: midwest center for structural genomics]]
+
-
[[Category: ne1496]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:19:40 2008''
+

Current revision

The crystal structure of the hypothetical protein NE1496

PDB ID 2fbl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools