4isj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:59, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4isj| PDB=4isj | SCENE= }}
 
-
===RNA Ligase RtcB in complex with Mn(II)===
 
-
{{ABSTRACT_PUBMED_23560983}}
 
-
==Function==
+
==RNA Ligase RtcB in complex with Mn(II)==
-
[[http://www.uniprot.org/uniprot/RTCB_PYRHO RTCB_PYRHO]] tRNA-splicing ligase that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs (By similarity).
+
<StructureSection load='4isj' size='340' side='right'caption='[[4isj]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4isj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ISJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ISJ FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.344&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4isj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4isj OCA], [https://pdbe.org/4isj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4isj RCSB], [https://www.ebi.ac.uk/pdbsum/4isj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4isj ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RTCB_PYRHO RTCB_PYRHO] tRNA-splicing ligase that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs (By similarity).
-
==About this Structure==
+
==See Also==
-
[[4isj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ISJ OCA].
+
*[[RNA ligase|RNA ligase]]
-
[[Category: Pyrococcus horikoshii ot3]]
+
__TOC__
-
[[Category: Bingman, C A.]]
+
</StructureSection>
-
[[Category: Desai, K K.]]
+
[[Category: Large Structures]]
-
[[Category: Phillips, G N.]]
+
[[Category: Pyrococcus horikoshii OT3]]
-
[[Category: Raines, R T.]]
+
[[Category: Bingman CA]]
-
[[Category: Ligase]]
+
[[Category: Desai KK]]
-
[[Category: Rna ligase]]
+
[[Category: Phillips Jr GN]]
 +
[[Category: Raines RT]]

Current revision

RNA Ligase RtcB in complex with Mn(II)

PDB ID 4isj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4isj"
Personal tools