2fgb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:23, 14 February 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fgb.jpg|left|200px]]<br /><applet load="2fgb" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2fgb, resolution 1.350&Aring;" />
 
-
'''Crystal structure of human 17bet a-hydroxysteroid dehydrogenase type 5 in complexes with PEG and NADP'''<br />
 
-
==About this Structure==
+
==Crystal structure of human 17bet a-hydroxysteroid dehydrogenase type 5 in complexes with PEG and NADP==
-
2FGB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=ACT:'>ACT</scene>, <scene name='pdbligand=P6G:'>P6G</scene> and <scene name='pdbligand=NAP:'>NAP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGB OCA].
+
<StructureSection load='2fgb' size='340' side='right'caption='[[2fgb]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
-
[[Category: Homo sapiens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2fgb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FGB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FGB FirstGlance]. <br>
-
[[Category: Azzi, A.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-
[[Category: Labrie, F.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr>
-
[[Category: Lin, S X.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fgb OCA], [https://pdbe.org/2fgb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fgb RCSB], [https://www.ebi.ac.uk/pdbsum/2fgb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fgb ProSAT]</span></td></tr>
-
[[Category: Luu-The, V.]]
+
</table>
-
[[Category: Qiu, W.]]
+
== Function ==
-
[[Category: Zhou, M.]]
+
[https://www.uniprot.org/uniprot/AK1C3_HUMAN AK1C3_HUMAN] Catalyzes the conversion of aldehydes and ketones to alcohols. Catalyzes the reduction of prostaglandin (PG) D2, PGH2 and phenanthrenequinone (PQ) and the oxidation of 9-alpha,11-beta-PGF2 to PGD2. Functions as a bi-directional 3-alpha-, 17-beta- and 20-alpha HSD. Can interconvert active androgens, estrogens and progestins with their cognate inactive metabolites. Preferentially transforms androstenedione (4-dione) to testosterone.
-
[[Category: ACT]]
+
== Evolutionary Conservation ==
-
[[Category: NAP]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: P6G]]
+
Check<jmol>
-
[[Category: (alpha/beta)8 barrel]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/2fgb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fgb ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:21:04 2008''
+
==See Also==
 +
*[[Prostaglandin F synthase 3D structures|Prostaglandin F synthase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Azzi A]]
 +
[[Category: Labrie F]]
 +
[[Category: Lin SX]]
 +
[[Category: Luu-The V]]
 +
[[Category: Qiu W]]
 +
[[Category: Zhou M]]

Current revision

Crystal structure of human 17bet a-hydroxysteroid dehydrogenase type 5 in complexes with PEG and NADP

PDB ID 2fgb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools