2ffg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:12, 17 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ffg.gif|left|200px]]<br /><applet load="2ffg" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ffg, resolution 2.31&Aring;" />
 
-
'''Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.'''<br />
 
-
==About this Structure==
+
==Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.==
-
2FFG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFG OCA].
+
<StructureSection load='2ffg' size='340' side='right'caption='[[2ffg]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2ffg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFG FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffg OCA], [https://pdbe.org/2ffg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffg RCSB], [https://www.ebi.ac.uk/pdbsum/2ffg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffg ProSAT], [https://www.topsan.org/Proteins/NESGC/2ffg TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YKUJ_BACSU YKUJ_BACSU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ffg ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Abashidze, M.]]
+
[[Category: Abashidze M]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton TB]]
-
[[Category: Conover, K.]]
+
[[Category: Conover K]]
-
[[Category: Cunningham, K.]]
+
[[Category: Cunningham K]]
-
[[Category: Forouhar, F.]]
+
[[Category: Forouhar F]]
-
[[Category: Ho, C K.]]
+
[[Category: Ho CK]]
-
[[Category: Hunt, J F.]]
+
[[Category: Hunt JF]]
-
[[Category: Janjua, H.]]
+
[[Category: Janjua H]]
-
[[Category: Kuzin, A P.]]
+
[[Category: Kuzin AP]]
-
[[Category: Ma, L C.]]
+
[[Category: Ma LC]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Tong L]]
-
[[Category: Tong, L.]]
+
[[Category: Vorobiev SM]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R.]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
[[Category: x-ray sr360 nesg ykuj]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:21:05 2008''
+

Current revision

Novel x-ray structure of the YkuJ protein from Bacillus subtilis. Northeast Structural Genomics target SR360.

PDB ID 2ffg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ffg"
Personal tools