2fki

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:56, 29 May 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2fki.gif|left|200px]]<br /><applet load="2fki" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2fki" />
 
-
'''NMR Structure of Protein yjbR from Escherichia coli; Northeast Structural Genomics Consortium Target ER226'''<br />
 
-
==About this Structure==
+
==NMR Structure of Protein yjbR from Escherichia coli; Northeast Structural Genomics Consortium Target ER226==
-
2FKI is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FKI OCA].
+
<StructureSection load='2fki' size='340' side='right'caption='[[2fki]]' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[2fki]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FKI FirstGlance]. <br>
-
NMR structure of protein yjbR from Escherichia coli reveals 'double-wing' DNA binding motif., Singarapu KK, Liu G, Xiao R, Bertonati C, Honig B, Montelione GT, Szyperski T, Proteins. 2007 May 1;67(2):501-4. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17266124 17266124]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fki OCA], [https://pdbe.org/2fki PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fki RCSB], [https://www.ebi.ac.uk/pdbsum/2fki PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fki ProSAT], [https://www.topsan.org/Proteins/NESGC/2fki TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YJBR_ECOLI YJBR_ECOLI]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/2fki_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fki ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Liu, G.]]
+
[[Category: Liu G]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Shetty KG]]
-
[[Category: Shetty, K G.]]
+
[[Category: Singarapu KK]]
-
[[Category: Singarapu, K K.]]
+
[[Category: Szyperski T]]
-
[[Category: Szyperski, T.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R.]]
+
-
[[Category: alpha-beta ]]
+
-
[[Category: er226]]
+
-
[[Category: gft-nmr]]
+
-
[[Category: nesg]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:22:21 2008''
+

Current revision

NMR Structure of Protein yjbR from Escherichia coli; Northeast Structural Genomics Consortium Target ER226

PDB ID 2fki

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools