4k7g

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:54, 20 September 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
{{STRUCTURE_4k7g| PDB=4k7g | SCENE= }}
 
-
===Crystal structure of a 3-hydroxyproline dehydratse from agrobacterium vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered active site===
 
-
==About this Structure==
+
==Crystal structure of a 3-hydroxyproline dehydratse from agrobacterium vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered active site==
-
[[4k7g]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhizobium_loessense Rhizobium loessense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K7G OCA].
+
<StructureSection load='4k7g' size='340' side='right'caption='[[4k7g]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Rhizobium loessense]]
+
== Structural highlights ==
-
[[Category: Almo, S C.]]
+
<table><tr><td colspan='2'>[[4k7g]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_vitis_S4 Agrobacterium vitis S4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4K7G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4K7G FirstGlance]. <br>
-
[[Category: Bhosle, R.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
[[Category: Chowdhury, S.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=PYC:PYRROLE-2-CARBOXYLATE'>PYC</scene></td></tr>
-
[[Category: EFI, Enzyme Function Initiative.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4k7g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4k7g OCA], [https://pdbe.org/4k7g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4k7g RCSB], [https://www.ebi.ac.uk/pdbsum/4k7g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4k7g ProSAT]</span></td></tr>
-
[[Category: Evans, B.]]
+
</table>
-
[[Category: Gerlt, J A.]]
+
== Function ==
-
[[Category: Glenn, A Scott.]]
+
[https://www.uniprot.org/uniprot/T3HPD_AGRVS T3HPD_AGRVS] Catalyzes the dehydration of trans-3-hydroxy-L-proline (t3LHyp) to Delta(1)-pyrroline-2-carboxylate (Pyr2C). Is likely involved in a degradation pathway that converts t3LHyp to L-proline. Displays neither proline racemase activity nor 4-hydroxyproline 2-epimerase activity.<ref>PMID:24980702</ref>
-
[[Category: Hammonds, J.]]
+
== References ==
-
[[Category: Hillerich, B.]]
+
<references/>
-
[[Category: Imker, H J.]]
+
__TOC__
-
[[Category: Love, J.]]
+
</StructureSection>
-
[[Category: Morisco, L L.]]
+
[[Category: Agrobacterium vitis S4]]
-
[[Category: Obaidi, N F.Al.]]
+
[[Category: Large Structures]]
-
[[Category: Seidel, R D.]]
+
[[Category: Al Obaidi NF]]
-
[[Category: Sojitra, S.]]
+
[[Category: Almo SC]]
-
[[Category: Stead, M.]]
+
[[Category: Bhosle R]]
-
[[Category: Toro, R.]]
+
[[Category: Chowdhury S]]
-
[[Category: Vetting, M W.]]
+
[[Category: Evans B]]
-
[[Category: Washington, E.]]
+
[[Category: Gerlt JA]]
-
[[Category: Wasserman, S R.]]
+
[[Category: Hammonds J]]
-
[[Category: Efi]]
+
[[Category: Hillerich B]]
-
[[Category: Enzyme function initiative]]
+
[[Category: Imker HJ]]
-
[[Category: Isomerase]]
+
[[Category: Love J]]
-
[[Category: Proline racemase family]]
+
[[Category: Morisco LL]]
-
[[Category: Proposed 3-oh proline dehydratase]]
+
[[Category: Scott Glenn A]]
-
[[Category: Structural genomic]]
+
[[Category: Seidel RD]]
 +
[[Category: Sojitra S]]
 +
[[Category: Stead M]]
 +
[[Category: Toro R]]
 +
[[Category: Vetting MW]]
 +
[[Category: Washington E]]
 +
[[Category: Wasserman SR]]

Current revision

Crystal structure of a 3-hydroxyproline dehydratse from agrobacterium vitis, target efi-506470, with bound pyrrole 2-carboxylate, ordered active site

PDB ID 4k7g

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools